7ch8 - Revision history

OCA at 19:30, 29 May 2024

2024-05-29T19:30:31Z

← Older revision		Revision as of 19:30, 29 May 2024
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	====		==Cryo-EM structure of P.aeruginosa MlaFEBD with ADP-V==
	<StructureSection load='7ch8' size='340' side='right'caption='[[7ch8]]' scene=''>		<StructureSection load='7ch8' size='340' side='right'caption='[[7ch8]], [[Resolution\|resolution]] 3.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>		<table><tr><td colspan='2'>[[7ch8]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7CH8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7CH8 FirstGlance]. <br>
	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ch8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ch8 OCA], [https://pdbe.org/7ch8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ch8 RCSB], [https://www.ebi.ac.uk/pdbsum/7ch8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ch8 ProSAT]</span></td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution\|Resolution]] 3.9Å</td></tr>
			<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AD9:ADP+METAVANADATE'>AD9</scene>, <scene name='pdbligand=LPP:2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL+HEXADECANOATE'>LPP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
			<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ch8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ch8 OCA], [https://pdbe.org/7ch8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ch8 RCSB], [https://www.ebi.ac.uk/pdbsum/7ch8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ch8 ProSAT]</span></td></tr>
	</table>		</table>
			== Function ==
			[https://www.uniprot.org/uniprot/Q9HVW3_PSEAE Q9HVW3_PSEAE]
			<div style="background-color:#fffaf0;">
			== Publication Abstract from PubMed ==
			The outer membrane (OM) of Gram-negative bacteria, which consists of lipopolysaccharides (LPS) in the outer leaflet and phospholipids (PLs) in the inner leaflet, plays a key role in antibiotic resistance and pathogen virulence. The maintenance of lipid asymmetry (Mla) pathway is known to be involved in PL transport and contributes to the lipid homeostasis of the OM, yet the underlying molecular mechanism and the directionality of PL transport in this pathway remain elusive. Here, we reported the cryo-EM structures of the ATP-binding cassette (ABC) transporter MlaFEBD from P. areuginosa, the core complex in the Mla pathway, in nucleotide-free (apo)-, ADP (ATP + vanadate)- and ATP (AMPPNP)-bound states as well as the structures of MlaFEB from E. coli in apo- and AMPPNP-bound states at a resolution range of 3.4-3.9 A. The structures show that the MlaFEBD complex contains a total of twelve protein molecules with a stoichiometry of MlaF(2)E(2)B(2)D(6), and binds a plethora of PLs at different locations. In contrast to canonical ABC transporters, nucleotide binding fails to trigger significant conformational changes of both MlaFEBD and MlaFEB in the nucleotide-binding and transmembrane domains of the ABC transporter, correlated with their low ATPase activities exhibited in both detergent micelles and lipid nanodiscs. Intriguingly, PLs or detergents appeared to relocate to the membrane-proximal end from the distal end of the hydrophobic tunnel formed by the MlaD hexamer in MlaFEBD upon addition of ATP, indicating that retrograde PL transport might occur in the tunnel in an ATP-dependent manner. Site-specific photocrosslinking experiment confirms that the substrate-binding pocket in the dimeric MlaE and the MlaD hexamer are able to bind PLs in vitro, in line with the notion that MlaFEBD complex functions as a PL transporter.

			Structural Insight into Phospholipid Transport by the MlaFEBD Complex from P. aeruginosa.,Zhou C, Shi H, Zhang M, Zhou L, Xiao L, Feng S, Im W, Zhou M, Zhang X, Huang Y J Mol Biol. 2021 Jun 25;433(13):166986. doi: 10.1016/j.jmb.2021.166986. Epub 2021 , May 11. PMID:33845086<ref>PMID:33845086</ref>

			From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
			</div>
			<div class="pdbe-citations 7ch8" style="background-color:#fffaf0;"></div>
			== References ==
			<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: ~~Z-disk~~]]		[[Category: Pseudomonas aeruginosa PAO1]]
			[[Category: Huang Y]]
			[[Category: Shi H]]
			[[Category: Zhang M]]
			[[Category: Zhou C]]

OCA at 05:29, 6 October 2021

2021-10-06T05:29:06Z

← Older revision		Revision as of 05:29, 6 October 2021
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	~~'''Unreleased structure'''~~

	~~The entry~~ 7ch8 ~~is ON HOLD until Paper Publication~~		====
			<StructureSection load='7ch8' size='340' side='right'caption='[[7ch8]]' scene=''>
	~~Authors~~: ~~Zhou, C~~.~~, Shi, H~~.~~, Zhang, M~~.~~, Huang, Y~~.		== Structural highlights ==
			<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
	~~Description~~: ~~Cryo-EM structure of P~~.~~aeruginosa MlaFEBD with ADP-V~~		</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ch8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ch8 OCA], [https://pdbe.org/7ch8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ch8 RCSB], [https://www.ebi.ac.uk/pdbsum/7ch8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ch8 ProSAT]</span></td></tr>
	[[~~Category~~: ~~Unreleased Structures~~]]		</table>
	[[~~Category~~: ~~Zhang~~, ~~M]]~~		__TOC__
	[[~~Category~~: ~~Shi, H]~~]		</StructureSection>
	[[Category: ~~Zhou, C~~]]		[[Category: Large Structures]]
	[[Category: ~~Huang, Y~~]]		[[Category: Z-disk]]

OCA at 08:04, 15 September 2021

2021-09-15T08:04:52Z

← Older revision		Revision as of 08:04, 15 September 2021
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	'''Unreleased structure'''		'''Unreleased structure'''

	The entry 7ch8 is ON HOLD		The entry 7ch8 is ON HOLD until Paper Publication

	Authors: Zhou, C., Shi, H., Zhang, M., Huang, Y.		Authors: Zhou, C., Shi, H., Zhang, M., Huang, Y.
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	Description: Cryo-EM structure of P.aeruginosa MlaFEBD with ADP-V		Description: Cryo-EM structure of P.aeruginosa MlaFEBD with ADP-V
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
	~~[[Category: Huang, Y]]~~
	[[Category: Zhang, M]]		[[Category: Zhang, M]]
	[[Category: Shi, H]]		[[Category: Shi, H]]
	[[Category: Zhou, C]]		[[Category: Zhou, C]]
			[[Category: Huang, Y]]

OCA: Protected "7ch8" [edit=sysop:move=sysop]

2020-07-22T08:27:22Z

Protected "7ch8" [edit=sysop:move=sysop]

← Older revision	Revision as of 08:27, 22 July 2020
(No difference)

OCA: New page: '''Unreleased structure''' The entry 7ch8 is ON HOLD Authors: Zhou, C., Shi, H., Zhang, M., Huang, Y. Description: Cryo-EM structure of P.aeruginosa MlaFEBD with ADP-V [[Category: Unre...

2020-07-22T08:27:20Z

New page: '''Unreleased structure''' The entry 7ch8 is ON HOLD Authors: Zhou, C., Shi, H., Zhang, M., Huang, Y. Description: Cryo-EM structure of P.aeruginosa MlaFEBD with ADP-V [[Category: Unre...

New page

'''Unreleased structure'''

The entry 7ch8 is ON HOLD

Authors: Zhou, C., Shi, H., Zhang, M., Huang, Y.

Description: Cryo-EM structure of P.aeruginosa MlaFEBD with ADP-V
[[Category: Unreleased Structures]]
[[Category: Huang, Y]]
[[Category: Zhang, M]]
[[Category: Shi, H]]
[[Category: Zhou, C]]