7ppb - Revision history

OCA at 13:07, 1 February 2024

2024-02-01T13:07:13Z

← Older revision		Revision as of 13:07, 1 February 2024
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	==2.4 angstrom crystal structure of bone morphogenetic protein receptor type II (BMPRII) extracellular domain in complex with BMP10==		==2.4 angstrom crystal structure of bone morphogenetic protein receptor type II (BMPRII) extracellular domain in complex with BMP10==
	<StructureSection load='7ppb' size='340' side='right'caption='[[7ppb]]' scene=''>		<StructureSection load='7ppb' size='340' side='right'caption='[[7ppb]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7PPB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7PPB FirstGlance]. <br>		<table><tr><td colspan='2'>[[7ppb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7PPB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7PPB FirstGlance]. <br>
	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ppb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ppb OCA], [https://pdbe.org/7ppb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ppb RCSB], [https://www.ebi.ac.uk/pdbsum/7ppb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ppb ProSAT]</span></td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.4Å</td></tr>
			<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ppb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ppb OCA], [https://pdbe.org/7ppb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ppb RCSB], [https://www.ebi.ac.uk/pdbsum/7ppb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ppb ProSAT]</span></td></tr>
	</table>		</table>
			== Function ==
			[https://www.uniprot.org/uniprot/BMP10_HUMAN BMP10_HUMAN] Required for maintaining the proliferative activity of embryonic cardiomyocytes by preventing premature activation of the negative cell cycle regulator CDKN1C/p57KIP and maintaining the required expression levels of cardiogenic factors such as MEF2C and NKX2-5. Acts as a ligand for ACVRL1/ALK1, BMPR1A/ALK3 and BMPR1B/ALK6, leading to activation of SMAD1, SMAD5 and SMAD8 transcription factors. Inhibits endothelial cell migration and growth. May reduce cell migration and cell matrix adhesion in breast cancer cell lines.<ref>PMID:16049014</ref> <ref>PMID:17068149</ref> <ref>PMID:20608934</ref>
			<div style="background-color:#fffaf0;">
			== Publication Abstract from PubMed ==
			Heterozygous mutations in BMPR2 (bone morphogenetic protein (BMP) receptor type II) cause pulmonary arterial hypertension. BMPRII is a receptor for over 15 BMP ligands, but why BMPR2 mutations cause lung-specific pathology is unknown. To elucidate the molecular basis of BMP:BMPRII interactions, we report crystal structures of binary and ternary BMPRII receptor complexes with BMP10, which contain an ensemble of seven different BMP10:BMPRII 1:1 complexes. BMPRII binds BMP10 at the knuckle epitope, with the A-loop and beta4 strand making BMPRII-specific interactions. The BMPRII binding surface on BMP10 is dynamic, and the affinity is weaker in the ternary complex than in the binary complex. Hydrophobic core and A-loop interactions are important in BMPRII-mediated signalling. Our data reveal how BMPRII is a low affinity receptor, implying that forming a signalling complex requires high concentrations of BMPRII, hence mutations will impact on tissues with highest BMPR2 expression such as the lung vasculature.

			Crystal structures of BMPRII extracellular domain in binary and ternary receptor complexes with BMP10.,Guo J, Liu B, Thorikay M, Yu M, Li X, Tong Z, Salmon RM, Read RJ, Ten Dijke P, Morrell NW, Li W Nat Commun. 2022 May 3;13(1):2395. doi: 10.1038/s41467-022-30111-2. PMID:35504921<ref>PMID:35504921</ref>

			From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
			</div>
			<div class="pdbe-citations 7ppb" style="background-color:#fffaf0;"></div>

			==See Also==
			*[[Bone morphogenetic protein 3D structures\|Bone morphogenetic protein 3D structures]]
			== References ==
			<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
			[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Guo J]]		[[Category: Guo J]]
	[[Category: Li W]]		[[Category: Li W]]
	[[Category: Yu M]]		[[Category: Yu M]]

OCA at 14:34, 31 August 2022

2022-08-31T14:34:24Z

← Older revision		Revision as of 14:34, 31 August 2022
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	====		==2.4 angstrom crystal structure of bone morphogenetic protein receptor type II (BMPRII) extracellular domain in complex with BMP10==
	<StructureSection load='7ppb' size='340' side='right'caption='[[7ppb]]' scene=''>		<StructureSection load='7ppb' size='340' side='right'caption='[[7ppb]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>		<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7PPB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7PPB FirstGlance]. <br>
	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ppb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ppb OCA], [https://pdbe.org/7ppb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ppb RCSB], [https://www.ebi.ac.uk/pdbsum/7ppb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ppb ProSAT]</span></td></tr>		</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ppb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ppb OCA], [https://pdbe.org/7ppb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ppb RCSB], [https://www.ebi.ac.uk/pdbsum/7ppb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ppb ProSAT]</span></td></tr>
	</table>		</table>
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: ~~Z-disk~~]]		[[Category: Guo J]]
			[[Category: Li W]]
			[[Category: Yu M]]

OCA at 06:18, 12 May 2022

2022-05-12T06:18:57Z

← Older revision		Revision as of 06:18, 12 May 2022
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	~~'''Unreleased structure'''~~

	~~The entry~~ 7ppb is ~~ON HOLD until Paper Publication~~		====
			<StructureSection load='7ppb' size='340' side='right'caption='[[7ppb]]' scene=''>
	~~Authors:~~		== Structural highlights ==
			<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
	~~Description~~:		</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ppb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ppb OCA], [https://pdbe.org/7ppb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ppb RCSB], [https://www.ebi.ac.uk/pdbsum/7ppb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ppb ProSAT]</span></td></tr>
	[[Category: ~~Unreleased Structures~~]]		</table>
			__TOC__
			</StructureSection>
			[[Category: Large Structures]]
			[[Category: Z-disk]]

OCA: Protected "7ppb" [edit=sysop:move=sysop]

2021-09-22T05:31:11Z

Protected "7ppb" [edit=sysop:move=sysop]

← Older revision	Revision as of 05:31, 22 September 2021
(No difference)

OCA: New page: '''Unreleased structure''' The entry 7ppb is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures

2021-09-22T05:31:10Z

New page: '''Unreleased structure''' The entry 7ppb is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 7ppb is ON HOLD until Paper Publication

Authors:

Description:
[[Category: Unreleased Structures]]