Bam complex - Revision history

Michal Harel at 10:31, 1 April 2019

2019-04-01T10:31:20Z

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 </StructureSection>
 == References ==
 <references/>
 [[Category:Topic Page]]

Michal Harel at 10:30, 1 April 2019

2019-04-01T10:30:18Z

← Older revision		Revision as of 10:30, 1 April 2019
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	*'''BamA''' contains five structurally homologous POTRA (POlypeptide TRAnslocation associated) domains. The POTRA domain has a β-α-α-β-β conformation. BamA barrel and at least a subset of its POTRAs are essential for viability. BamA was found also in mitochondria and chloroplasts.<br />		*'''BamA''' contains five structurally homologous POTRA (POlypeptide TRAnslocation associated) domains. The POTRA domain has a β-α-α-β-β conformation. BamA barrel and at least a subset of its POTRAs are essential for viability. BamA was found also in mitochondria and chloroplasts.<br />
	*'''BamD''' is composed of multiple tetratricopeptide (TPR) repeats packed into a superhelical structure. TPR is a motif containing 2 antiparallel α-helices. TPRs are found in scaffold multiprotein complexes and are involved in protein-protein interactions.		*'''BamD''' is composed of multiple tetratricopeptide (TPR) repeats packed into a superhelical structure. TPR is a motif containing 2 antiparallel α-helices. TPRs are found in scaffold multiprotein complexes and are involved in protein-protein interactions.

			== 3D Structures of Bam complex ==
			[[Bam complex 3D structures]]

	</StructureSection>		</StructureSection>
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	**[[4c4v]] – EcBamA residues 344-808 <br />		**[[4c4v]] – EcBamA residues 344-808 <br />
	**[[4pk1]] – EcBamA/BamB <br />		**[[4pk1]] – EcBamA/BamB <br />
	**[[4n75]] – EcBamA barrel domain residues 427-810<br />		**[[4n75]], [[6fsu]] – EcBamA barrel domain residues 427-810<br />
	**[[3og5]], [[3q6b]] – EcBamA POTRA45 domain residues 264-424<br />		**[[3og5]], [[3q6b]] – EcBamA POTRA45 domain residues 264-424<br />

Michal Harel at 07:36, 28 March 2018

2018-03-28T07:36:38Z

← Older revision		Revision as of 07:36, 28 March 2018
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	*BamA (Omp85)		*BamA (Omp85)

	**[[4k3b]] – ~~BamA~~ – ''Neisseria gonorrhoeae'' <br />		**[[4k3b]] – NgBamA – ''Neisseria gonorrhoeae'' <br />
	**[[4k3c]] – BamA – ''Haemophilus ducreyi'' <br />		**[[4k3c]] – BamA – ''Haemophilus ducreyi'' <br />
	**[[~~4c4v~~]] – EcBamA – ''Escherichia coli'' <br />		**[[5or1]] – BamA – Salmonella typhimurium<br />
			**[[2qcz]], [[2qdf]] – EcBamA residues 21-351 – ''Escherichia coli'' <br />
			**[[3q6b]] – EcBamA POTRA1-2 domain residues 21-174<br />
			**[[3efc]] – EcBamA periplasmic domain residues 21-410<br />
			**[[4c4v]] – EcBamA residues 344-808 <br />
	**[[4pk1]] – EcBamA/BamB <br />		**[[4pk1]] – EcBamA/BamB <br />
	**[[4n75]] – EcBamA barrel domain<br />		**[[4n75]] – EcBamA barrel domain residues 427-810<br />
	**[[3og5]], [[3q6b]] – EcBamA POTRA45 domain<br />		**[[3og5]], [[3q6b]] – EcBamA POTRA45 domain residues 264-424<br />

	*BamB (Lipoprotein YFGL)		*BamB (Lipoprotein YFGL)
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	**[[2yhc]], [[3q5m]] – EcBamD residues 29-245 <br />		**[[2yhc]], [[3q5m]] – EcBamD residues 29-245 <br />
	**[[3qky]] – RmBamD residues 24-280 – ''Rhodothermus marinus''<br />		**[[3qky]] – RmBamD residues 24-280 – ''Rhodothermus marinus''<br />

	**[[3tgo]] – EcBamD residues 21-245 + lipoprotein 34<br />		**[[3tgo]] – EcBamD residues 21-245 + lipoprotein 34<br />
			**[[5waq]] – NgBamD<br />

	*BamE (Small protein A)		*BamE (Small protein A)
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	**[[2kxx]] – EcBamE residues 21-114 - NMR <br />		**[[2kxx]] – EcBamE residues 21-114 - NMR <br />
	**[[2km7]] – EcBamE residues 21-114 (mutant) - NMR <br />		**[[2km7]] – EcBamE residues 21-114 (mutant) - NMR <br />
			**[[5wam]] – NgBamE<br />

	*BamA+BamB		*BamA+BamB

Joel L. Sussman at 11:50, 19 October 2017

2017-10-19T11:50:46Z

← Older revision		Revision as of 11:50, 19 October 2017
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	<StructureSection load='~~4n75~~' size='340' side='right' caption='E. coli BamA barrel domain (PDB code [[4n75]])' scene='70/706705/Cv/2'>		<StructureSection load='' size='340' side='right' caption='E. coli BamA barrel domain (PDB code [[4n75]])' scene='70/706705/Cv/2'>

	== Function ==		== Function ==

Michal Harel at 20:48, 18 October 2017

2017-10-18T20:48:40Z

← Older revision		Revision as of 20:48, 18 October 2017
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	== References ==		== References ==
	<references/>		<references/>
			[[Category:Topic Page]]

Michal Harel at 08:02, 14 March 2017

2017-03-14T08:02:36Z

← Older revision		Revision as of 08:02, 14 March 2017
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	**[[2yhc]], [[3q5m]] – EcBamD residues 29-245 <br />		**[[2yhc]], [[3q5m]] – EcBamD residues 29-245 <br />
	**[[3qky]] – ~~BamD~~ residues 24-280 – ''Rhodothermus marinus''<br />		**[[3qky]] – RmBamD residues 24-280 – ''Rhodothermus marinus''<br />

	**[[3tgo]] – EcBamD residues 21-245 + lipoprotein 34<br />		**[[3tgo]] – EcBamD residues 21-245 + lipoprotein 34<br />
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	**[[2kxx]] – EcBamE residues 21-114 - NMR <br />		**[[2kxx]] – EcBamE residues 21-114 - NMR <br />
	**[[2km7]] – EcBamE residues 21-114 (mutant) - NMR <br />		**[[2km7]] – EcBamE residues 21-114 (mutant) - NMR <br />

			*BamA+BamB

			**[[4xga]] – EcBam <br />

			*BamA+BamD

			**[[5efr]] – RmBam <br />

			*BamA+BamC+BamD+BamE

			**[[5ekq]], [[5d0q]] – EcBam <br />

			*BamA+BamB+BamC+BamD+BamE

			**[[5d0o]], [[5ayw]] – EcBam <br />
			**[[5ljo]] – EcBam – Cryo EM <br />

	}}		}}

	== References ==		== References ==
	<references/>		<references/>

Alexander Berchansky at 12:33, 13 January 2016

2016-01-13T12:33:06Z

← Older revision		Revision as of 12:33, 13 January 2016
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	<StructureSection load='4n75' size='340' side='right' caption='E. coli BamA barrel domain (PDB code [[4n75]])' scene='70/706705/Cv/1'>		<StructureSection load='4n75' size='340' side='right' caption='E. coli BamA barrel domain (PDB code [[4n75]])' scene='70/706705/Cv/2'>

	== Function ==		== Function ==

Alexander Berchansky at 12:03, 15 November 2015

2015-11-15T12:03:36Z

← Older revision		Revision as of 12:03, 15 November 2015
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	<StructureSection load='4n75' size='340' side='right' caption='E. coli BamA barrel domain (PDB code [[4n75]])' scene=''>		<StructureSection load='4n75' size='340' side='right' caption='E. coli BamA barrel domain (PDB code [[4n75]])' scene='70/706705/Cv/1'>

	== Function ==		== Function ==

Alexander Berchansky at 12:00, 15 November 2015

2015-11-15T12:00:43Z

← Older revision		Revision as of 12:00, 15 November 2015
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	== Function ==		== Function ==

	The '''Bam''' (β-Barrel Assembly Machinery) drives the assembly of β-barrel proteins into the outer membrane of gram-negative bacteria.		The '''Bam''' (β-Barrel Assembly Machinery) drives the assembly of β-barrel proteins into the outer membrane of gram-negative bacteria.<ref>PMID:19182809</ref>

	== Structural highlights ==		== Structural highlights ==

Michal Harel at 08:37, 9 November 2015

2015-11-09T08:37:34Z

← Older revision		Revision as of 08:37, 9 November 2015
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	<StructureSection load='4n75' size='340' side='right' caption='E. coli BamA~~/BamB~~ (PDB code [[~~4pk1~~]])' scene=''>		<StructureSection load='4n75' size='340' side='right' caption='E. coli BamA barrel domain (PDB code [[4n75]])' scene=''>

	== Function ==		== Function ==