Collagen 3D structures - Revision history

Michal Harel at 08:52, 3 February 2025

2025-02-03T08:52:21Z

← Older revision		Revision as of 08:52, 3 February 2025
Line 4:		Line 4:
	{{#tree:id=OrganizedByTopic\|openlevels=0\|		{{#tree:id=OrganizedByTopic\|openlevels=0\|

	* Collagen		* Collagen; Domain – triple helix 1-30

	**[[3hqv]], [[3hr2]] – Col I – rat – fiber diffraction<br />		**[[3hqv]], [[3hr2]] – Col I – rat – fiber diffraction<br />
	**[[5k31]] - hCol I 1 residues 1219-1464 - human<br />		**[[5k31]] - hCol I 1 residues 1219-1464 - human<br />
			**[[8k4w]] - hCol I triple helix domain<br />
			**[[6jkl]], [[6jec]], [[9j1t]], [[9j23]] - hCol II triple helix domain <br />
	**[[6jkl]], [[6jec]] - hCol II 0-28<br />		**[[6jkl]], [[6jec]] - hCol II 0-28<br />
	**[[5nir]] - hCol II 1 VWC domain residues 29-98<br />		**[[5nir]] - hCol II 1 VWC domain residues 29-98<br />
Line 17:		Line 19:
	**[[1kth]] - hCol III α3 Kunitz type domain<br />		**[[1kth]] - hCol III α3 Kunitz type domain<br />
	**[[1kun]] - hCol III α3 Kunitz type domain – NMR<BR />		**[[1kun]] - hCol III α3 Kunitz type domain – NMR<BR />
			**[[7wwr]], [[7wws]], [[7xan]], [[8hhi]], [[8hhk]] - hCol III triple helix domain <br />
	**[[5nay]] - hCol IV α1 Nc1 domain<br />		**[[5nay]] - hCol IV α1 Nc1 domain<br />
	**[[5nb2]], [[1li1]] - hCol IV α2 Nc1 domain<br />		**[[5nb2]], [[1li1]] - hCol IV α2 Nc1 domain<br />
Line 24:		Line 27:
	**[[6mpx]], [[5nax]] - hCol IV α1+α2<br />		**[[6mpx]], [[5nax]] - hCol IV α1+α2<br />
	**[[6wku]] - hCol IV α3+α4+α5 Nc1 domain<br />		**[[6wku]] - hCol IV α3+α4+α5 Nc1 domain<br />
			**[[8zmm]], [[9j1t]], [[9j26]] - hCol IV triple helix domain<br />
	**[[1t60]], [[1t61]], [[1m3d]] - Col IV α Nc1 domain – bovine<br />		**[[1t60]], [[1t61]], [[1m3d]] - Col IV α Nc1 domain – bovine<br />
			**[[8tys]], [[8txn]] - Col IV α Nc1 domain – ''Drosophila melanogaster''
			**[[7y37]] - hCol V triple helix domain<br />
	**[[2knt]], [[1knt]] - hCol VI Kunitz type domain<br />		**[[2knt]], [[1knt]] - hCol VI Kunitz type domain<br />
			**[[6snk]] - hCol VI α3 N2 domain 1634-1833<br />
	**[[4igi]] - mCol VI α3 N5 domain – mouse<br />		**[[4igi]] - mCol VI α3 N5 domain – mouse<br />
	**[[4ihk]] - mCol VI α3 N5 domain (mutant)<br />		**[[4ihk]] - mCol VI α3 N5 domain (mutant)<br />
			**[[8zmw]] - hCol VII triple helix domain<br />
	**[[6s4c]] - mCol VII α1 <br />		**[[6s4c]] - mCol VII α1 <br />
	**[[1o91]] - mCol VIII α1 Nc1 domain <br />		**[[1o91]] - mCol VIII α1 Nc1 domain <br />
Line 36:		Line 44:
	**[[3n3f]] – hCol XIV Nc1 domain<br />		**[[3n3f]] – hCol XIV Nc1 domain<br />
	**[[1dy2]] - mCol XV endostatin domain<br />		**[[1dy2]] - mCol XV endostatin domain<br />
			**[[8izs]], [[8k4x]], [[8zmo]], [[8zmv]] - hCol XVII triple helix domain <br />
	**[[3hon]], [[3hsh]] - hCol XVIII tetramerization domain<br />		**[[3hon]], [[3hsh]] - hCol XVIII tetramerization domain<br />
	**[[1bnl]] - hCol XVIII C terminal domain<br />		**[[1bnl]] - hCol XVIII C terminal domain<br />

Michal Harel at 10:08, 8 June 2021

2021-06-08T10:08:50Z

← Older revision		Revision as of 10:08, 8 June 2021
Line 23:		Line 23:
	**[[5naz]] - hCol IV α5 Nc1 domain<br />		**[[5naz]] - hCol IV α5 Nc1 domain<br />
	**[[6mpx]], [[5nax]] - hCol IV α1+α2<br />		**[[6mpx]], [[5nax]] - hCol IV α1+α2<br />
			**[[6wku]] - hCol IV α3+α4+α5 Nc1 domain<br />
	**[[1t60]], [[1t61]], [[1m3d]] - Col IV α Nc1 domain – bovine<br />		**[[1t60]], [[1t61]], [[1m3d]] - Col IV α Nc1 domain – bovine<br />
	**[[2knt]], [[1knt]] - hCol VI Kunitz type domain<br />		**[[2knt]], [[1knt]] - hCol VI Kunitz type domain<br />

Michal Harel at 10:00, 6 July 2020

2020-07-06T10:00:11Z

Michal Harel: New page: ==3D structures of collagen== Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| * Collagen **3hqv, 3hr2 – ...

2019-05-14T09:02:56Z

New page: ==3D structures of collagen== Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| * Collagen **3hqv, 3hr2 – ...

New page

==3D structures of collagen==

Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
{{#tree:id=OrganizedByTopic|openlevels=0|

* Collagen

**[[3hqv]], [[3hr2]] – Col I – rat – fiber diffraction 
**[[5k31]] - hCol I 1 residues 1219-1464 - human 
**[[5nir]] - hCol II 1 VWC domain residues 29-98 
**[[1u5m]] - hCol II α1 (mutant) 
**[[3dmw]] - hCol III α1residues 1158-1199 (mutant) 
**[[4ae2]] - hCol III residues 1222-1466 
**[[4aej]], [[4ak3]] - hCol III residues 1222-1466 (mutant) 
**[[1kth]] - hCol III α3 Kunitz type domain 
**[[1kun]] - hCol III α3 Kunitz type domain – NMR 
**[[5nay]] - hCol IV α1 Nc1 domain 
**[[5nb2]], [[1li1]] - hCol IV α2 Nc1 domain 
**[[5nb0]] - hCol IV α3 Nc1 domain 
**[[5nb1]] - hCol IV α4 Nc1 domain 
**[[5naz]] - hCol IV α5 Nc1 domain 
**[[6mpx]], [[5nax]] - hCol IV α1+α2 
**[[1t60]], [[1t61]], [[1m3d]] - Col IV α Nc1 domain – bovine 
**[[2knt]], [[1knt]] - hCol VI Kunitz type domain 
**[[4igi]] - mCol VI α3 N5 domain – mouse 
**[[4ihk]] - mCol VI α3 N5 domain (mutant) 
**[[1o91]] - mCol VIII α1 Nc1 domain 
**[[2uur]] - hCol IX α1 Nc4 domain 
**[[1b9p]], [[1b9q]] - Col IX α1 Nc4 domain (mutant) 
**[[5cvb]], [[5cva]], [[5cti]], [[5ctd]] - Col IX α1+ α2+ α3 
**[[1gr3]] - hCol X α1 Nc1 domain 
**[[3n3f]] – hCol XIV Nc1 domain 
**[[1dy2]] - mCol XV endostatin domain 
**[[3hon]], [[3hsh]] - hCol XVIII tetramerization domain 
**[[1bnl]] - hCol XVIII C terminal domain 
**[[1dy0]], [[1dy1]] - mCol XVIII endostatin domain 
**[[2ekj]], [[2ee3]], [[5kf4]] - hCol XX α1 fn3 domain 
**[[2dkm]] - hCol XX α1 fn3 domain - NMR 
**[[3ipn]] – Col modified 
**[[1wzb]], [[1itt]], [[1k6f]], [[1ym8]] – Col triple helix 
**[[1zpx]], [[1sp7]], [[1sop]] – Col mini – hydra – NMR 
**[[2cuo]], [[2d3f]], [[2d3h]], [[2g66]] – Col model peptides 
**[[5yan]] – Col – synthetic 
**[[2fse]] – hCol II + MHC HLA-DR1 
**[[2seb]] - hCol II + MHC HLA-DR4 
**[[2v53]] - hCol III α1 + Sparc 
**[[6fzw]], [[6fzv]] - hCol III α1 + procollagen endopeptidase enhancer 
**[[2wuh]] – hCol + discoidin domain receptor 2 
**[[1dzi]] – Col + integrin α2 domain 
**[[2f6a]] – Col + Col adhesin
}}

[[Category:Topic Page]]

← Older revision		Revision as of 10:00, 6 July 2020
Line 8:		Line 8:
	**[[3hqv]], [[3hr2]] – Col I – rat – fiber diffraction<br />		**[[3hqv]], [[3hr2]] – Col I – rat – fiber diffraction<br />
	**[[5k31]] - hCol I 1 residues 1219-1464 - human<br />		**[[5k31]] - hCol I 1 residues 1219-1464 - human<br />
			**[[6jkl]], [[6jec]] - hCol II 0-28<br />
	**[[5nir]] - hCol II 1 VWC domain residues 29-98<br />		**[[5nir]] - hCol II 1 VWC domain residues 29-98<br />
	**[[1u5m]] - hCol II α1 (mutant) <br />		**[[1u5m]] - hCol II α1 (mutant) <br />
			**[[6hg7]] - hCol II 1 residues 1116-1153<br />
	**[[3dmw]] - hCol III α1residues 1158-1199 (mutant)<br />		**[[3dmw]] - hCol III α1residues 1158-1199 (mutant)<br />
	**[[4ae2]] - hCol III residues 1222-1466<br />		**[[4ae2]] - hCol III residues 1222-1466<br />
Line 25:		Line 27:
	**[[4igi]] - mCol VI α3 N5 domain – mouse<br />		**[[4igi]] - mCol VI α3 N5 domain – mouse<br />
	**[[4ihk]] - mCol VI α3 N5 domain (mutant)<br />		**[[4ihk]] - mCol VI α3 N5 domain (mutant)<br />
			**[[6s4c]] - mCol VII α1 <br />
	**[[1o91]] - mCol VIII α1 Nc1 domain <br />		**[[1o91]] - mCol VIII α1 Nc1 domain <br />
	**[[2uur]] - hCol IX α1 Nc4 domain<br />		**[[2uur]] - hCol IX α1 Nc4 domain<br />