Sorting nexin 3D structures - Revision history

Michal Harel at 10:41, 21 November 2023

2023-11-21T10:41:15Z

← Older revision		Revision as of 10:41, 21 November 2023
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	{{#tree:id=OrganizedByTopic\|openlevels=0\|		{{#tree:id=OrganizedByTopic\|openlevels=0\|

	*Sorting nexin 1		*Sorting nexin 1; Domains – PX 142-269; BAR 301-522

	**[[2i4k]] – hSNX PX domain ~~142-269~~ - human - NMR<br />		**[[2i4k]] – hSNX PX domain - human - NMR<br />
	**[[4fzs]] – hSNX BAR domain ~~301~~-~~522~~<br />		**[[4fzs]] – hSNX BAR domain<br />
			**[[8afz]] – hSNX1 + hSNX5 + cation-independent mannose-6-phosphate receptor peptide – Cryo EM<br />
			**[[8a1g]], [[8abq]] – hSNX1 BAR domain + hSNX5 195-404 <br />
	**[[7d6d]], [[7d6e]] – mSNX – mouse – Cryo EM<br />		**[[7d6d]], [[7d6e]] – mSNX – mouse – Cryo EM<br />

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	*Sorting nexin 5		*Sorting nexin 5

	**[[5tgh]], [[~~5tgi~~]], [[5wy2]] – hSNX PX domain + INCE<br />		**[[5tgh]], [[5tgj]], [[5wy2]] – hSNX PX domain + INCE<br />
	**[[6n5z]], [[6n5y]], [[6n5x]] – hSNX PX domain + peptide<br />		**[[6n5z]], [[6n5y]], [[6n5x]] – hSNX PX domain + peptide<br />
	**[[3hpb]], [[3hpc]] – rSNX PX domain – rat<br />		**[[3hpb]], [[3hpc]] – rSNX PX domain – rat<br />
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	**[[2rai]], [[2raj]], [[2rak]], [[3dyt]], [[3dyu]] – hSNX PX-BAR domain 230-595<br />		**[[2rai]], [[2raj]], [[2rak]], [[3dyt]], [[3dyu]] – hSNX PX-BAR domain 230-595<br />
			**[[7oj9]] – hSNX SH3 domain 1-64 + Eeev peptide - NMR<br />
	**[[3lge]] – SNX residues 152-182 + aldolase – rabbit<br />		**[[3lge]] – SNX residues 152-182 + aldolase – rabbit<br />
	**[[2enm]] – mSNX SH3 domain 1-70- NMR<br />		**[[2enm]] – mSNX SH3 domain 1-70- NMR<br />
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	**[[2csk]] – hSNX PX domain <br />		**[[2csk]] – hSNX PX domain <br />

			*Sorting nexin 13

			**[[7wf6]] – hSNX RGS domain 373-516<br />

	*Sorting nexin 14		*Sorting nexin 14
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	**[[5woe]] – hSNX Phox hiomology domain 506-628- NMR<br />		**[[5woe]] – hSNX Phox hiomology domain 506-628- NMR<br />
	**[[7sr1]], [[7sr2]] – hSNX G-protein signaling domain 446-567<br />		**[[7sr1]], [[7sr2]] – hSNX G-protein signaling domain 446-567<br />
			**[[7wf8]], [[7wf9]] – mSNX RGS domain 280-405<br />
	**[[5xdz]] – SNX PX domain - zebrafish<br />		**[[5xdz]] – SNX PX domain - zebrafish<br />

	*Sorting nexin 27		*Sorting nexin 27; Domains – PDZ 39-141; PX 156-265; Ferm 273-526

	**[[4has]], [[5zn9]] – hSNX PX domain 156-265<br />		**[[4has]], [[5zn9]] – hSNX PX domain 156-265<br />
	**[[6sak]] – hSNX PX domain + otulin<br />		**[[6sak]] – hSNX PX domain + otulin<br />
	**[[7e0b]] – hSNX ~~40-135~~ + PBM<br />		**[[7e0b]] – hSNX PDZ domain + PBM<br />
	**[[7ct1]] – hSNX Ferm domain ~~273-526~~<br />		**[[7ct1]] – hSNX Ferm domain<br />
			**[[7p72]] – hSNX PDZ domain + envelope small membrane protein peptide <br />
			**[[7pcb]] – hSNX PDZ domain/annexin A2<br />
	**[[3qdo]], [[3qe1]] – rSNX PDZ domain/GIRK3 C terminal <br />		**[[3qdo]], [[3qe1]] – rSNX PDZ domain/GIRK3 C terminal <br />
	**[[3qgl]] – rSNX PDZ domain 39-133 + GIRK3 C terminal <br />		**[[3qgl]] – rSNX PDZ domain 39-133 + GIRK3 C terminal <br />

Michal Harel at 09:34, 7 April 2022

2022-04-07T09:34:26Z

← Older revision		Revision as of 09:34, 7 April 2022
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	*Sorting nexin 1		*Sorting nexin 1

	**[[2i4k]] – hSNX PX domain - human - NMR<br />		**[[2i4k]] – hSNX PX domain 142-269 - human - NMR<br />
	**[[4fzs]] – hSNX BAR domain <br />		**[[4fzs]] – hSNX BAR domain 301-522<br />
			**[[7d6d]], [[7d6e]] – mSNX – mouse – Cryo EM<br />

	*Sorting nexin 3		*Sorting nexin 3

	**[[2mxc]] – hSNX - NMR <br />		**[[2mxc]] – hSNX - NMR <br />
	**[[2yps]] – hSNX PX domain <br />		**[[2yps]] – hSNX PX domain 24-155<br />
			**[[7blo]] – mSNX + vacuolar protein sorting-associated protein 35 + vacuolar protein sorting-associated protein 26A + WLS – Cryo EM<br />
	**[[5f0j]] – hSNX PX domain + VPS26 + VPS35<br />		**[[5f0j]] – hSNX PX domain + VPS26 + VPS35<br />
	**[[5f0l]], [[5f0m]], [[5f0p]] – hSNX + VPS26 + VPS35 + DMT1 peptide<br />		**[[5f0l]], [[5f0m]], [[5f0p]] – hSNX + VPS26 + VPS35 + DMT1 peptide<br />
	**[[1ocs]] – ySNX PX domain – yeast<br />		**[[1ocs]] – ySNX PX domain – yeast<br />
	**[[1ocu]] – ySNX PX domain + phosphatidylinositol-3-phosphate<br />		**[[1ocu]] – ySNX PX domain + phosphatidylinositol-3-phosphate<br />
			**[[7blq]] – SNX + vacuolar protein sorting-associated protein 35 + vacuolar protein sorting-associated protein 26-like + KEX2 cargo – ''Chaetomium thermophilum'' – Cryo EM<br />

	*Sorting nexin 5		*Sorting nexin 5
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	**[[6n5z]], [[6n5y]], [[6n5x]] – hSNX PX domain + peptide<br />		**[[6n5z]], [[6n5y]], [[6n5x]] – hSNX PX domain + peptide<br />
	**[[3hpb]], [[3hpc]] – rSNX PX domain – rat<br />		**[[3hpb]], [[3hpc]] – rSNX PX domain – rat<br />
	**[[5tp1]] – mSNX PX domain + INCE ~~- mouse~~<br />		**[[5tp1]] – mSNX PX domain + INCE <br />

	*Sorting nexin 7		*Sorting nexin 7
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	*Sorting nexin 9		*Sorting nexin 9

	**[[2rai]], [[2raj]], [[2rak]], [[3dyt]], [[3dyu]] – hSNX PX-BAR domain <br />		**[[2rai]], [[2raj]], [[2rak]], [[3dyt]], [[3dyu]] – hSNX PX-BAR domain 230-595<br />
	**[[3lge]] – SNX residues 152-182 + aldolase – rabbit<br />		**[[3lge]] – SNX residues 152-182 + aldolase – rabbit<br />
	**[[2enm]] – mSNX SH3 domain - NMR<br />		**[[2enm]] – mSNX SH3 domain 1-70- NMR<br />

	*Sorting nexin 10		*Sorting nexin 10
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	**[[3fog]], [[3lui]] – hSNX PX domain <br />		**[[3fog]], [[3lui]] – hSNX PX domain <br />
	**[[4gxb]], [[4tkn]] – hSNX FERM domain + NPXY motif<br />		**[[4gxb]], [[4tkn]] – hSNX FERM domain 111-388 + NPXY motif<br />

	*Sorting nexin 21		*Sorting nexin 21

	**[[4ymr]] – mSNX PX/TPR domain <br />		**[[4ymr]] – mSNX PXB/TPR domain 230-363<br />

	*Sorting nexin 22		*Sorting nexin 22
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	*Sorting nexin 25		*Sorting nexin 25

	**[[5woe]] – hSNX Phox hiomology domain - NMR<br />		**[[5woe]] – hSNX Phox hiomology domain 506-628- NMR<br />
			**[[7sr1]], [[7sr2]] – hSNX G-protein signaling domain 446-567<br />
	**[[5xdz]] – SNX PX domain - zebrafish<br />		**[[5xdz]] – SNX PX domain - zebrafish<br />

	*Sorting nexin 27		*Sorting nexin 27

	**[[4has]], [[5zn9]] – hSNX PX domain <br />		**[[4has]], [[5zn9]] – hSNX PX domain 156-265<br />
	**[[6sak]] – hSNX PX domain + otulin<br />		**[[6sak]] – hSNX PX domain + otulin<br />
			**[[7e0b]] – hSNX 40-135 + PBM<br />
			**[[7ct1]] – hSNX Ferm domain 273-526<br />
	**[[3qdo]], [[3qe1]] – rSNX PDZ domain/GIRK3 C terminal <br />		**[[3qdo]], [[3qe1]] – rSNX PDZ domain/GIRK3 C terminal <br />
	**[[3qgl]] – rSNX PDZ domain + GIRK3 C terminal <br />		**[[3qgl]] – rSNX PDZ domain 39-133 + GIRK3 C terminal <br />
	**[[5elq]] – rSNX PDZ domain + DGKζ C terminal <br />		**[[5elq]] – rSNX PDZ domain + DGKζ C terminal <br />
	**[[5em9]], [[5ema]], [[5emb]], [[4z8j]] – rSNX PDZ domain + PDZ-binding motif <br />		**[[5em9]], [[5ema]], [[5emb]], [[4z8j]] – rSNX PDZ domain + PDZ-binding motif <br />
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	*Sorting nexin 33		*Sorting nexin 33

	**[[4akv]] – hSNX PH-BAR domain <br />		**[[4akv]] – hSNX PH-BAR domain 212-574<br />

	*Sorting nexin		*Sorting nexin

Michal Harel at 08:16, 11 November 2020

2020-11-11T08:16:40Z

← Older revision		Revision as of 08:16, 11 November 2020
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	**[[5tgh]], [[5tgi]], [[5wy2]] – hSNX PX domain + INCE<br />		**[[5tgh]], [[5tgi]], [[5wy2]] – hSNX PX domain + INCE<br />
			**[[6n5z]], [[6n5y]], [[6n5x]] – hSNX PX domain + peptide<br />
	**[[3hpb]], [[3hpc]] – rSNX PX domain – rat<br />		**[[3hpb]], [[3hpc]] – rSNX PX domain – rat<br />
	**[[5tp1]] – mSNX PX domain + INCE - mouse<br />		**[[5tp1]] – mSNX PX domain + INCE - mouse<br />
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	*Sorting nexin 11		*Sorting nexin 11

	**[[4ikb]], [[4ikd]], [[6koi]] – hSNX PX domain <br />		**[[4ikb]], [[4ikd]], [[6koi]], [[6kok]] – hSNX PX domain <br />
			**[[6koj]] – hSNX PX domain + PI(3,5)P2<br />

	*Sorting nexin 12		*Sorting nexin 12

Michal Harel at 09:49, 8 November 2020

2020-11-08T09:49:31Z

← Older revision		Revision as of 09:49, 8 November 2020
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	*Sorting nexin 11		*Sorting nexin 11

	**[[4ikb]], [[4ikd]] – hSNX PX domain <br />		**[[4ikb]], [[4ikd]], [[6koi]] – hSNX PX domain <br />

	*Sorting nexin 12		*Sorting nexin 12
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	**[[3hpb]], [[3hpc]] – rSNX PX domain<br />		**[[3hpb]], [[3hpc]] – rSNX PX domain<br />

			*Sorting nexin MVP1

			**[[6q0x]] – ySNX – Cryo EM<br />
	}}		}}

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Michal Harel at 09:30, 8 November 2020

2020-11-08T09:30:12Z

← Older revision		Revision as of 09:30, 8 November 2020
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	*Sorting nexin 25		*Sorting nexin 25

			**[[5woe]] – hSNX Phox hiomology domain - NMR<br />
	**[[5xdz]] – SNX PX domain - zebrafish<br />		**[[5xdz]] – SNX PX domain - zebrafish<br />
	**[[5woe]] – hSNX Phox hiomology domain - NMR<br />

	*Sorting nexin 27		*Sorting nexin 27
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	*Sorting nexin		*Sorting nexin

	**[[3hpb]], [[3hpc]] – rSNX PX domain ~~– rat~~<br />		**[[3hpb]], [[3hpc]] – rSNX PX domain<br />
	}}		}}

	[[Category:Topic Page]]		[[Category:Topic Page]]

Michal Harel at 08:54, 5 November 2020

2020-11-05T08:54:21Z

← Older revision		Revision as of 08:54, 5 November 2020
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	**[[5tgh]], [[5tgi]], [[5wy2]] – hSNX PX domain + INCE<br />		**[[5tgh]], [[5tgi]], [[5wy2]] – hSNX PX domain + INCE<br />
	**[[3hpb]], [[3hpc]] – rSNX PX domain – rat<br />		**[[3hpb]], [[3hpc]] – rSNX PX domain – rat<br />
	**[[5tp1]] – mSNX PX domain + INCE<br />		**[[5tp1]] – mSNX PX domain + INCE - mouse<br />

	*Sorting nexin 7		*Sorting nexin 7
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	*Sorting nexin 9		*Sorting nexin 9

	**[[2enm]] – SNX SH3 domain – mouse - NMR<br />
	**[[2rai]], [[2raj]], [[2rak]], [[3dyt]], [[3dyu]] – hSNX PX-BAR domain <br />		**[[2rai]], [[2raj]], [[2rak]], [[3dyt]], [[3dyu]] – hSNX PX-BAR domain <br />
	**[[3lge]] – SNX residues 152-182 + aldolase – rabbit<br />		**[[3lge]] – SNX residues 152-182 + aldolase – rabbit<br />
			**[[2enm]] – mSNX SH3 domain - NMR<br />

	*Sorting nexin 10		*Sorting nexin 10

Michal Harel: New page: ==3D structures of sorting nexin== Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *Sorting nexin 1 **2i4k –...

2020-02-09T09:36:21Z

New page: ==3D structures of sorting nexin== Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *Sorting nexin 1 **2i4k –...

New page

==3D structures of sorting nexin==

Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
{{#tree:id=OrganizedByTopic|openlevels=0|

*Sorting nexin 1

**[[2i4k]] – hSNX PX domain - human - NMR 
**[[4fzs]] – hSNX BAR domain 

*Sorting nexin 3

**[[2mxc]] – hSNX - NMR 
**[[2yps]] – hSNX PX domain 
**[[5f0j]] – hSNX PX domain + VPS26 + VPS35 
**[[5f0l]], [[5f0m]], [[5f0p]] – hSNX + VPS26 + VPS35 + DMT1 peptide 
**[[1ocs]] – ySNX PX domain – yeast 
**[[1ocu]] – ySNX PX domain + phosphatidylinositol-3-phosphate 

*Sorting nexin 5

**[[5tgh]], [[5tgi]], [[5wy2]] – hSNX PX domain + INCE 
**[[3hpb]], [[3hpc]] – rSNX PX domain – rat 
**[[5tp1]] – mSNX PX domain + INCE 

*Sorting nexin 7

**[[3iq2]] – hSNX PX domain 

*Sorting nexin 9

**[[2enm]] – SNX SH3 domain – mouse - NMR 
**[[2rai]], [[2raj]], [[2rak]], [[3dyt]], [[3dyu]] – hSNX PX-BAR domain 
**[[3lge]] – SNX residues 152-182 + aldolase – rabbit 

*Sorting nexin 10

**[[4on3]], [[4pzg]] – hSNX residues 1-201 

*Sorting nexin 11

**[[4ikb]], [[4ikd]] – hSNX PX domain 

*Sorting nexin 12

**[[2csk]] – hSNX PX domain 

*Sorting nexin 14

**[[4bgj]], [[4pqo]], [[4pqp]] – hSNX PX domain 

*Sorting nexin 15

**[[6mbi]], [[6ecm]] – hSNX PX domain 

*Sorting nexin 16

**[[5gw0]], [[5gw1]] – hSNX PX-coiled coll domain 

*Sorting nexin 17

**[[3fog]], [[3lui]] – hSNX PX domain 
**[[4gxb]], [[4tkn]] – hSNX FERM domain + NPXY motif 

*Sorting nexin 21

**[[4ymr]] – mSNX PX/TPR domain 

*Sorting nexin 22

**[[2ett]] – hSNX PX domain - NMR 

*Sorting nexin 23

**[[6ee0]] – hSNX PX domain 

*Sorting nexin 24

**[[4az9]] – hSNX PX domain 

*Sorting nexin 25

**[[5xdz]] – SNX PX domain - zebrafish 
**[[5woe]] – hSNX Phox hiomology domain - NMR 

*Sorting nexin 27

**[[4has]], [[5zn9]] – hSNX PX domain 
**[[6sak]] – hSNX PX domain + otulin 
**[[3qdo]], [[3qe1]] – rSNX PDZ domain/GIRK3 C terminal 
**[[3qgl]] – rSNX PDZ domain + GIRK3 C terminal 
**[[5elq]] – rSNX PDZ domain + DGKζ C terminal 
**[[5em9]], [[5ema]], [[5emb]], [[4z8j]] – rSNX PDZ domain + PDZ-binding motif 
**[[4p2a]] – rSNX PDZ domain + VPSA26 
**[[4z8j]] – rSNX PDZ domain + parathyroid hormone receptor PDZ domain 

*Sorting nexin 32

**[[6e8r]] – hSNX PX domain + INCE 

*Sorting nexin 33

**[[4akv]] – hSNX PH-BAR domain 

*Sorting nexin

**[[3hpb]], [[3hpc]] – rSNX PX domain – rat 
}}

[[Category:Topic Page]]