Symporter: Difference between revisions

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<StructureSection load='' size='350' side='right' caption='Dipeptide: H+ symporter (green) complex with dipeptide (cyan), lipid and phosphate (PDB code [[4d2c]])' scene='70/705726/Initial/2'>
<StructureSection load='' size='350' side='right' caption='Dipeptide: H+ symporter (green) complex with dipeptide (cyan), lipid and phosphate (PDB code [[4d2c]])' scene='70/705726/Initial/2'>
== Function ==
== Function ==
Symporter (Symp) is a co-transporter membrane protein which transports two or more different molecules across the plasma membrane in the same direction<ref>PMID:12588808</ref>.
'''Symporter''' (Symp) is a co-transporter membrane protein which transports two or more different molecules across the plasma membrane in the same direction<ref>PMID:12588808</ref>.


== Disease ==
== Disease ==
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== Structural highlights ==
== Structural highlights ==
Dipeptide: <scene name='70/705726/Cv/5'>H symporter binds the dipeptide</scene> between its N- and C-terminal bundles<ref>PMID:24916388</ref>.
Dipeptide: <scene name='70/705726/Cv/5'>H symporter binds the dipeptide</scene> between its N- and C-terminal bundles<ref>PMID:24916388</ref>.
</StructureSection>


== 3D Structures of symporter ==
== 3D Structures of symporter ==
[[Symporter 3D structures]]


Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
</StructureSection>
{{#tree:id=OrganizedByTopic|openlevels=0|
 
*D-xylose/H+ symporter
 
**[[4ja4]], [[4qiq]] – EcSymp – ''Escherichia coli''<BR />
**[[4ja3]] – EcSymp (mutant) <BR />
**[[4gby]] – EcSymp + xylose <BR />
**[[4gbz]], [[4gc0]] – EcSymp + glucose derivative<BR />
 
*Di-or tripeptide/H+ symporter
 
**[[4ja4]], [[4xni]], [[4xnj]], [[4d2b]], [[4aps]], [[5d6k]], [[5mmt]], [[5d6k]], [[5oxo]], [[5oxp]], [[5oxq]], [[6eia]], [[6fmr]], [[6fmy]] – StSymp – ''Streptococcus thermophilus''<BR />
**[[4d2d]], [[6ghj]] – StSymp + tripeptide<BR />
**[[4d2c]], [[5d58]], [[5d59]], [[5oxk]], [[5oxl]], [[5oxm]], [[5oxn]] – StSymp + dipeptide<BR />
 
*Oligopeptide/H+ symporter
 
**[[4lep]], [[4tph]] – SoSymp – ''Shewanella oneidensis''<BR />
**[[2xut]] – SoSymp (mutant) <BR />
**[[4tpg]], [[4tpj]] – SoSymp + tripeptide<BR />
 
*Bile acid/Na+ symporter
 
**[[4n7w]] – YfSymp – ''Yersinia frederiksenii''<BR />
**[[4n7x]] – YfSymp (mutant) <BR />
**[[3zuy]] – Symp - ''Neisseria meningitidis''<BR />
**[[3zux]] – Symp (mutant) <BR />
 
*L-fucose/H+ symporter
 
**[[3o7q]] – EcSymp <BR />
**[[3o7p]] – EcSymp (mutant)<BR />
 
*Lactose/H+ symporter
 
**[[1pv6]] – EcSymp (mutant)<BR />
**[[1pv7]], [[4oaa]] – EcSymp (mutant) + thiodigalactoside<BR />
 
*Glucose/Na+ symporter
 
**[[2xq2]] – VpSymp (mutant) – ''Vibrio parahaemolyticus''<BR />
**[[3dh4]] – VpSymp + galactose <BR />
**[[4m64]] – Symp (mutant) - ''Salmonella typhimurium''<BR />
 
*Citrate/Na+ symporter
 
**[[5a1s]] – Symp + citrate + Na – ''Salmonella enterica''<BR />
**[[5x9r]], [[5xas]], [[5xat]] – KpSymp + citrate + Na – ''Klebsiella pneumoniae''<BR />
**[[4bpq]], [[5xar]] – KpSymp <BR />
 
*Neurotransmitter/leucine symporter LeuT
 
**[[5jaf]], [[5jae]] – AaSymp - ''Aquifex aeolicus''<BR />
**[[5jag]] – AaSymp (mutant) <BR />
**[[3gjd]] – AaSymp + Na <BR />
**[[3f48]] – AaSymp + alaine + Na<BR />
**[[3tu0]] – AaSymp (mutant) + alanine + Na <BR />
**[[3f4j]] – AaSymp + glycine + Na<BR />
**[[2a65]], [[3f3e]], [[3usg]], [[3usi]], [[3usj]], [[3usk]] – AaSymp + leucine + Na<BR />
**[[3mpn]], [[3mpq]], [[3gjc]], [[4hmk]], [[4hod]], [[4fxz]] – AaSymp (mutant) + leucine + Na<BR />
**[[3f3a]] – AaSymp + tryptophan + Na <BR />
**[[3qs4]], [[3qs5]], [[3qs6]] – AaSymp (mutant) + tryptophan + Na <BR />
**[[3f3c]] – AaSymp + phenylalanine + Na <BR />
**[[3f3d]], [[3f4i]], [[3usl]], [[3usm]], [[3uso]] – AaSymp + methionine derivative + Na <BR />
**[[4fy0]] – AaSymp (mutant) + methionine + Na <BR />
**[[2qei]] – AaSymp + alaine + clomipramine + Na<BR />
**[[3gwu]] – AaSymp + sertraline + Na<BR />
**[[3gwv]], [[3gww]], [[2qb4]], [[2q6h]], [[2q72]], [[2qju]] – AaSymp + drug + Na<BR />
**[[4mm4]] – AaSymp (mutant) + drug + Na<BR />
**[[3usp]] – AaSymp + glucoside derivative + Na <BR />
**[[3tt1]], [[3tt3]] – AaSymp (mutant) + antibody + Na <BR />
 
*Divalent ion/Na+ symporter
 
**[[5ul7]], [[5ul9]], [[5uld]], [[5ule]], [[4f35]] – Symp + Na – ''Vibrio cholerae''<BR />
 
*Purine/H+ symporter
 
**[[5i6c]] – Symp + xanthine – ''Aspergillus nidulans''<BR />
 
*Glutamate/H+ symporter
 
**[[5dwy]], [[4ky0]] – TkSymp – ''Thermococcus kodakarensis''<BR />
**[[5e9s]] – TkSymp + aspartate<BR />
**[[4oyf]] – PhSymp - ''Pyrococcus horikishii'' <BR />
**[[2nwl]] – PhSymp (mutant) + aspartate<BR />


}}
== References ==
== References ==
<references/>
<references/>
[[Category:Topic Page]]
[[Category:Topic Page]]

Latest revision as of 11:12, 15 November 2020

Dipeptide: H+ symporter (green) complex with dipeptide (cyan), lipid and phosphate (PDB code 4d2c)

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References

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman