2id3: Difference between revisions

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New page: left|200px<br /><applet load="2id3" size="350" color="white" frame="true" align="right" spinBox="true" caption="2id3, resolution 1.70Å" /> '''Crystal structure of...
 
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[[Image:2id3.gif|left|200px]]<br /><applet load="2id3" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2id3, resolution 1.70&Aring;" />
'''Crystal structure of transcriptional regulator SCO5951 from Streptomyces coelicolor A3(2)'''<br />


==About this Structure==
==Crystal structure of transcriptional regulator SCO5951 from Streptomyces coelicolor A3(2)==
2ID3 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Streptomyces_coelicolor Streptomyces coelicolor] with <scene name='pdbligand=CA:'>CA</scene> and <scene name='pdbligand=CL:'>CL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ID3 OCA].  
<StructureSection load='2id3' size='340' side='right'caption='[[2id3]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
[[Category: Streptomyces coelicolor]]
<table><tr><td colspan='2'>[[2id3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"actinomyces_coelicolor"_(muller_1908)_lieske_1921 "actinomyces coelicolor" (muller 1908) lieske 1921]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ID3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ID3 FirstGlance]. <br>
[[Category: Chruszcz, M.]]
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
[[Category: Cymborowski, M.]]
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Edwards, A.]]
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SCO5951 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1902 "Actinomyces coelicolor" (Muller 1908) Lieske 1921])</td></tr>
[[Category: Grabowski, M.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2id3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2id3 OCA], [https://pdbe.org/2id3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2id3 RCSB], [https://www.ebi.ac.uk/pdbsum/2id3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2id3 ProSAT], [https://www.topsan.org/Proteins/MCSG/2id3 TOPSAN]</span></td></tr>
[[Category: Gu, J.]]
</table>
[[Category: Koclega, K.D.]]
== Evolutionary Conservation ==
[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Minor, W.]]
Check<jmol>
[[Category: Savchenko, A.]]
  <jmolCheckbox>
[[Category: Xu, X.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/id/2id3_consurf.spt"</scriptWhenChecked>
[[Category: CA]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: CL]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: mcsg]]
  </jmolCheckbox>
[[Category: midwest center for structural genomics]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2id3 ConSurf].
[[Category: protein structure initiative]]
<div style="clear:both"></div>
[[Category: psi-2]]
__TOC__
[[Category: structural genomics]]
</StructureSection>
[[Category: transcriptional regulator]]
[[Category: Large Structures]]
 
[[Category: Chruszcz, M]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 20:39:07 2008''
[[Category: Cymborowski, M]]
[[Category: Edwards, A]]
[[Category: Grabowski, M]]
[[Category: Gu, J]]
[[Category: Joachimiak, A]]
[[Category: Koclega, K D]]
[[Category: Structural genomic]]
[[Category: Minor, W]]
[[Category: Savchenko, A]]
[[Category: Xu, X]]
[[Category: Mcsg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Transcription]]
[[Category: Transcriptional regulator]]
Retrieved from "https://proteopedia.org/2id3"