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New page: left|200px<br /><applet load="1kid" size="450" color="white" frame="true" align="right" spinBox="true" caption="1kid, resolution 1.7Å" /> '''GROEL (HSP60 CLASS) F...
 
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[[Image:1kid.jpg|left|200px]]<br /><applet load="1kid" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1kid, resolution 1.7&Aring;" />
'''GROEL (HSP60 CLASS) FRAGMENT (APICAL DOMAIN) COMPRISING RESIDUES 191-376, MUTANT WITH ALA 262 REPLACED WITH LEU AND ILE 267 REPLACED WITH MET'''<br />


==Overview==
==GROEL (HSP60 CLASS) FRAGMENT (APICAL DOMAIN) COMPRISING RESIDUES 191-376, MUTANT WITH ALA 262 REPLACED WITH LEU AND ILE 267 REPLACED WITH MET==
A monomeric peptide fragment of GroEL, consisting of residues 191-376, is, a mini-chaperone with a functional chaperoning activity. We have solved, the crystal structure at 1.7 A resolution of GroEL(191-376) with a, 17-residue N-terminal tag. The N-terminal tag of one molecule binds in the, active site of a neighboring molecule in the crystal. This appears to, mimic the binding of a peptide substrate molecule. Seven substrate, residues are bound in a relatively extended conformation. Interactions, between the substrate and the active site are predominantly hydrophobic, but there are also four hydrogen bonds between the main chain of the, substrate and side chains of the active site. Although the preferred, conformation of a bound substrate is essentially extended, the flexibility, of the active site may allow it to accommodate the binding of exposed, hydrophobic surfaces in general, such as molten globule-type structures., GroEL can therefore help unfold proteins by binding to a hydrophobic, region and exert a binding pressure toward the fully unfolded state, thus, acting as an "unfoldase." The structure of the mini-chaperone is very, similar to that of residues 191-376 in intact GroEL, so we can build it, into GroEL and reconstruct how a peptide can bind to the tetradecamer. A, ring of connected binding sites is noted that can explain many aspects of, substrate binding and activity.
<StructureSection load='1kid' size='340' side='right'caption='[[1kid]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1kid]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KID OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KID FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kid FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kid OCA], [https://pdbe.org/1kid PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kid RCSB], [https://www.ebi.ac.uk/pdbsum/1kid PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kid ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/CH60_ECOLI CH60_ECOLI] Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.[HAMAP-Rule:MF_00600]  Essential for the growth of the bacteria and the assembly of several bacteriophages. Also plays a role in coupling between replication of the F plasmid and cell division of the cell.[HAMAP-Rule:MF_00600]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ki/1kid_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1kid ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
A monomeric peptide fragment of GroEL, consisting of residues 191-376, is a mini-chaperone with a functional chaperoning activity. We have solved the crystal structure at 1.7 A resolution of GroEL(191-376) with a 17-residue N-terminal tag. The N-terminal tag of one molecule binds in the active site of a neighboring molecule in the crystal. This appears to mimic the binding of a peptide substrate molecule. Seven substrate residues are bound in a relatively extended conformation. Interactions between the substrate and the active site are predominantly hydrophobic, but there are also four hydrogen bonds between the main chain of the substrate and side chains of the active site. Although the preferred conformation of a bound substrate is essentially extended, the flexibility of the active site may allow it to accommodate the binding of exposed hydrophobic surfaces in general, such as molten globule-type structures. GroEL can therefore help unfold proteins by binding to a hydrophobic region and exert a binding pressure toward the fully unfolded state, thus acting as an "unfoldase." The structure of the mini-chaperone is very similar to that of residues 191-376 in intact GroEL, so we can build it into GroEL and reconstruct how a peptide can bind to the tetradecamer. A ring of connected binding sites is noted that can explain many aspects of substrate binding and activity.


==About this Structure==
A structural model for GroEL-polypeptide recognition.,Buckle AM, Zahn R, Fersht AR Proc Natl Acad Sci U S A. 1997 Apr 15;94(8):3571-5. PMID:9108017<ref>PMID:9108017</ref>
1KID is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1KID OCA].


==Reference==
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
A structural model for GroEL-polypeptide recognition., Buckle AM, Zahn R, Fersht AR, Proc Natl Acad Sci U S A. 1997 Apr 15;94(8):3571-5. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=9108017 9108017]
</div>
<div class="pdbe-citations 1kid" style="background-color:#fffaf0;"></div>
 
==See Also==
*[[Heat Shock Protein structures|Heat Shock Protein structures]]
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Buckle, A.M.]]
[[Category: Buckle AM]]
[[Category: Fersht, A.R.]]
[[Category: Fersht AR]]
[[Category: atp-binding]]
[[Category: cell division]]
[[Category: chaperone]]
[[Category: groel]]
[[Category: hsp60]]
[[Category: phosphorylation]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 19:16:02 2007''

Latest revision as of 06:28, 9 August 2023

GROEL (HSP60 CLASS) FRAGMENT (APICAL DOMAIN) COMPRISING RESIDUES 191-376, MUTANT WITH ALA 262 REPLACED WITH LEU AND ILE 267 REPLACED WITH MET

1kid, resolution 1.70Å

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