2och: Difference between revisions

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[[Image:2och.gif|left|200px]]


{{Structure
==J-domain of dnj-12 from Caenorhabditis elegans==
|PDB= 2och |SIZE=350|CAPTION= <scene name='initialview01'>2och</scene>, resolution 1.86&Aring;
<StructureSection load='2och' size='340' side='right'caption='[[2och]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[2och]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OCH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OCH FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.86&#8491;</td></tr>
|GENE= dnj-12 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6239 Caenorhabditis elegans])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2och FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2och OCA], [https://pdbe.org/2och PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2och RCSB], [https://www.ebi.ac.uk/pdbsum/2och PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2och ProSAT], [https://www.topsan.org/Proteins/MCSG/2och TOPSAN]</span></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00226 DnaJ]</span>
</table>
|RELATEDENTRY=[[2o37|2O37]], [[1bqz|1BQZ]]
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2och FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2och OCA], [http://www.ebi.ac.uk/pdbsum/2och PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2och RCSB]</span>
[https://www.uniprot.org/uniprot/O45502_CAEEL O45502_CAEEL]
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''J-domain of dnj-12 from Caenorhabditis elegans'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oc/2och_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
2OCH is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OCH OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2och ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Caenorhabditis elegans]]
[[Category: Caenorhabditis elegans]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Gu, M.]]
[[Category: Gu M]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Maltseva N]]
[[Category: Maltseva, N.]]
[[Category: Morimoto RI]]
[[Category: Morimoto, R I.]]
[[Category: Osipiuk J]]
[[Category: Osipiuk, J.]]
[[Category: Voisine C]]
[[Category: Voisine, C.]]
[[Category: apc90013 2]]
[[Category: chaperone]]
[[Category: hsp40]]
[[Category: j-domain]]
[[Category: mcsg]]
[[Category: midwest center for structural genomic]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:15:49 2008''

Latest revision as of 10:35, 30 August 2023

J-domain of dnj-12 from Caenorhabditis elegans

2och, resolution 1.86Å

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