3gfg: Difference between revisions
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==Structure of putative oxidoreductase yvaA from Bacillus subtilis in triclinic form== | ==Structure of putative oxidoreductase yvaA from Bacillus subtilis in triclinic form== | ||
<StructureSection load='3gfg' size='340' side='right' caption='[[3gfg]], [[Resolution|resolution]] 2.59Å' scene=''> | <StructureSection load='3gfg' size='340' side='right'caption='[[3gfg]], [[Resolution|resolution]] 2.59Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3gfg]] is a 12 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3gfg]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GFG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GFG FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.59Å</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gfg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gfg OCA], [https://pdbe.org/3gfg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gfg RCSB], [https://www.ebi.ac.uk/pdbsum/3gfg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gfg ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3gfg TOPSAN]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/IOLW_BACSU IOLW_BACSU] Catalyzes the NADP(+)-dependent oxidation of scyllo-inositol to 2,4,6/3,5-pentahydroxycyclohexanone (scyllo-inosose).<ref>PMID:20133360</ref> | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gf/3gfg_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gf/3gfg_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gfg ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
== References == | |||
<references/> | |||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Bacillus subtilis subsp. subtilis]] | [[Category: Bacillus subtilis subsp. subtilis str. 168]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Almo SC]] | |||
[[Category: Burley SK]] | |||
[[Category: Chang S]] | |||
[[Category: Gilmore M]] | |||
[[Category: Ramagopal UA]] | |||
[[Category: Toro R]] | |||
Latest revision as of 07:05, 6 September 2023
Structure of putative oxidoreductase yvaA from Bacillus subtilis in triclinic form
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