5j8d: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:


==Structure of nitroreductase from E. cloacae complexed with nicotinic acid adenine dinucleotide==
==Structure of nitroreductase from E. cloacae complexed with nicotinic acid adenine dinucleotide==
<StructureSection load='5j8d' size='340' side='right' caption='[[5j8d]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
<StructureSection load='5j8d' size='340' side='right'caption='[[5j8d]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5j8d]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"aerobacter_cloacae"_(jordan_1890)_bergey_et_al._1923 "aerobacter cloacae" (jordan 1890) bergey et al. 1923]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J8D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5J8D FirstGlance]. <br>
<table><tr><td colspan='2'>[[5j8d]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterobacter_cloacae Enterobacter cloacae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J8D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5J8D FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DND:NICOTINIC+ACID+ADENINE+DINUCLEOTIDE'>DND</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1kqb|1kqb]], [[1kqc|1kqc]], [[1kqd|1kqd]], [[5j8g|5j8g]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DND:NICOTINIC+ACID+ADENINE+DINUCLEOTIDE'>DND</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nfsB, nfnB, nfsI ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=550 "Aerobacter cloacae" (Jordan 1890) Bergey et al. 1923])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5j8d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j8d OCA], [https://pdbe.org/5j8d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5j8d RCSB], [https://www.ebi.ac.uk/pdbsum/5j8d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5j8d ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5j8d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j8d OCA], [http://pdbe.org/5j8d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5j8d RCSB], [http://www.ebi.ac.uk/pdbsum/5j8d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5j8d ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/NFSB_ENTCL NFSB_ENTCL]] Reduction of a variety of nitroaromatic compounds using NADH (and to lesser extent NADPH) as source of reducing equivalents; two electrons are transferred.  
[https://www.uniprot.org/uniprot/NFSB_ENTCL NFSB_ENTCL] Reduction of a variety of nitroaromatic compounds using NADH (and to lesser extent NADPH) as source of reducing equivalents; two electrons are transferred.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 19:
</div>
</div>
<div class="pdbe-citations 5j8d" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5j8d" style="background-color:#fffaf0;"></div>
==See Also==
*[[Nitroreductase 3D structures|Nitroreductase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Haynes, C A]]
[[Category: Enterobacter cloacae]]
[[Category: Koder, R L]]
[[Category: Large Structures]]
[[Category: Miller, A F]]
[[Category: Haynes CA]]
[[Category: Rodgers, D W]]
[[Category: Koder RL]]
[[Category: Complex]]
[[Category: Miller AF]]
[[Category: Naad]]
[[Category: Rodgers DW]]
[[Category: Nitroreductase]]
[[Category: Oxidoreductase]]
[[Category: Substrate]]