2cwd: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(15 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2cwd.gif|left|200px]]<br /><applet load="2cwd" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2cwd, resolution 1.90&Aring;" />
'''Crystal Structure of TT1001 protein from Thermus thermophilus HB8'''<br />


==About this Structure==
==Crystal Structure of TT1001 protein from Thermus thermophilus HB8==
2CWD is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus] with <scene name='pdbligand=MG:'>MG</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CWD OCA].
<StructureSection load='2cwd' size='340' side='right'caption='[[2cwd]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
[[Category: Thermus thermophilus]]
<table><tr><td colspan='2'>[[2cwd]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CWD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CWD FirstGlance]. <br>
[[Category: Kunishima, N.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
[[Category: Lokanath, N K.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cwd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cwd OCA], [https://pdbe.org/2cwd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cwd RCSB], [https://www.ebi.ac.uk/pdbsum/2cwd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cwd ProSAT], [https://www.topsan.org/Proteins/RSGI/2cwd TOPSAN]</span></td></tr>
[[Category: Terao, Y.]]
</table>
[[Category: MG]]
== Function ==
[[Category: national project on protein structural and functional analyses]]
[https://www.uniprot.org/uniprot/Q5SJ34_THET8 Q5SJ34_THET8]  
[[Category: nppsfa]]
== Evolutionary Conservation ==
[[Category: riken structural genomics/proteomics initiative]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: rsgi]]
Check<jmol>
[[Category: structural genomics]]
  <jmolCheckbox>
[[Category: tyrosine phosphatase]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cw/2cwd_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cwd ConSurf].
<div style="clear:both"></div>


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:53:01 2008''
==See Also==
*[[Tyrosine phosphatase 3D structures|Tyrosine phosphatase 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus HB8]]
[[Category: Kunishima N]]
[[Category: Lokanath NK]]
[[Category: Terao Y]]

Latest revision as of 08:20, 25 October 2023

Crystal Structure of TT1001 protein from Thermus thermophilus HB8

2cwd, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA