2d54: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(13 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2d54.jpg|left|200px]]


{{Structure
==Crystal Structure of Methionyl tRNA Synthetase Y225A Mutant from Thermus Thermophilus==
|PDB= 2d54 |SIZE=350|CAPTION= <scene name='initialview01'>2d54</scene>, resolution 2.0&Aring;
<StructureSection load='2d54' size='340' side='right'caption='[[2d54]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
<table><tr><td colspan='2'>[[2d54]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D54 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D54 FirstGlance]. <br>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Methionine--tRNA_ligase Methionine--tRNA ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.10 6.1.1.10] </span>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d54 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d54 OCA], [https://pdbe.org/2d54 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d54 RCSB], [https://www.ebi.ac.uk/pdbsum/2d54 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d54 ProSAT], [https://www.topsan.org/Proteins/RSGI/2d54 TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d54 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d54 OCA], [http://www.ebi.ac.uk/pdbsum/2d54 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2d54 RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/SYM_THET8 SYM_THET8] Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d5/2d54_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d54 ConSurf].
<div style="clear:both"></div>


'''Crystal Structure of Methionyl tRNA Synthetase Y225A Mutant from Thermus Thermophilus'''
==See Also==
 
*[[Aminoacyl tRNA synthetase 3D structures|Aminoacyl tRNA synthetase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2D54 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D54 OCA].
[[Category: Large Structures]]
[[Category: Methionine--tRNA ligase]]
[[Category: Single protein]]
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
[[Category: Ishii, R.]]
[[Category: Ishii R]]
[[Category: Konno, M.]]
[[Category: Konno M]]
[[Category: Mori, Y.]]
[[Category: Mori Y]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Takasaka R]]
[[Category: Takasaka, R.]]
[[Category: Takeda R]]
[[Category: Takeda, R.]]
[[Category: Yokoyama S]]
[[Category: Yokoyama, S.]]
[[Category: class 1a aar]]
[[Category: isomerase]]
[[Category: national project on protein structural and functional analyse]]
[[Category: nppsfa]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rossmann fold]]
[[Category: rsgi]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:30:25 2008''

Latest revision as of 08:24, 25 October 2023

Crystal Structure of Methionyl tRNA Synthetase Y225A Mutant from Thermus Thermophilus

2d54, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=2d54&oldid=3923736"