2dvl: Difference between revisions

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New page: left|200px<br /><applet load="2dvl" size="350" color="white" frame="true" align="right" spinBox="true" caption="2dvl, resolution 2.50Å" /> '''Crystal structure of...
 
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[[Image:2dvl.jpg|left|200px]]<br /><applet load="2dvl" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2dvl, resolution 2.50&Aring;" />
'''Crystal structure of project TT0160 from Thermus thermophilus HB8'''<br />


==About this Structure==
==Crystal structure of project TT0160 from Thermus thermophilus HB8==
2DVL is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus] with <scene name='pdbligand=FAD:'>FAD</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DVL OCA].  
<StructureSection load='2dvl' size='340' side='right'caption='[[2dvl]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
[[Category: Thermus thermophilus]]
<table><tr><td colspan='2'>[[2dvl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DVL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DVL FirstGlance]. <br>
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
[[Category: Shimizu, K.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
[[Category: FAD]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dvl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dvl OCA], [https://pdbe.org/2dvl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dvl RCSB], [https://www.ebi.ac.uk/pdbsum/2dvl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dvl ProSAT], [https://www.topsan.org/Proteins/RSGI/2dvl TOPSAN]</span></td></tr>
[[Category: national project on protein structural and functional analyses]]
</table>
[[Category: nppsfa]]
== Function ==
[[Category: riken structural genomics/proteomics initiative]]
[https://www.uniprot.org/uniprot/Q5SH14_THET8 Q5SH14_THET8]  
[[Category: rsgi]]
== Evolutionary Conservation ==
[[Category: structural genomics]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dv/2dvl_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dvl ConSurf].
<div style="clear:both"></div>


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 19:13:02 2008''
==See Also==
*[[Acyl-CoA dehydrogenase 3D structures|Acyl-CoA dehydrogenase 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus HB8]]
[[Category: Shimizu K]]
Retrieved from "https://proteopedia.org/2dvl"