2dy0: Difference between revisions
From Proteopedia
Jump to navigationJump to search
New page: left|200px<br /><applet load="2dy0" size="450" color="white" frame="true" align="right" spinBox="true" caption="2dy0, resolution 1.25Å" /> '''Crystal structure of... |
No edit summary |
||
| (15 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
== | ==Crystal structure of project JW0458 from Escherichia coli== | ||
<StructureSection load='2dy0' size='340' side='right'caption='[[2dy0]], [[Resolution|resolution]] 1.25Å' scene=''> | |||
== Structural highlights == | |||
[ | <table><tr><td colspan='2'>[[2dy0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DY0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DY0 FirstGlance]. <br> | ||
[ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.25Å</td></tr> | ||
[ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dy0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dy0 OCA], [https://pdbe.org/2dy0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dy0 RCSB], [https://www.ebi.ac.uk/pdbsum/2dy0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dy0 ProSAT], [https://www.topsan.org/Proteins/RSGI/2dy0 TOPSAN]</span></td></tr> | ||
[[ | </table> | ||
== Function == | |||
[ | [https://www.uniprot.org/uniprot/APT_ECOLI APT_ECOLI] Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | ||
[[ | == Evolutionary Conservation == | ||
[ | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dy/2dy0_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dy0 ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | |||
*[[Phosphoribosyltransferase 3D structures|Phosphoribosyltransferase 3D structures]] | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Escherichia coli K-12]] | |||
[[Category: Large Structures]] | |||
[[Category: Shimizu K]] | |||
Latest revision as of 08:31, 25 October 2023
Crystal structure of project JW0458 from Escherichia coli
| ||||||||||||
