2dy1: Difference between revisions

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{{Seed}}
[[Image:2dy1.png|left|200px]]


<!--
==Crystal structure of EF-G-2 from Thermus thermophilus==
The line below this paragraph, containing "STRUCTURE_2dy1", creates the "Structure Box" on the page.
<StructureSection load='2dy1' size='340' side='right'caption='[[2dy1]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2dy1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DY1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DY1 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_2dy1| PDB=2dy1 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dy1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dy1 OCA], [https://pdbe.org/2dy1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dy1 RCSB], [https://www.ebi.ac.uk/pdbsum/2dy1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dy1 ProSAT], [https://www.topsan.org/Proteins/RSGI/2dy1 TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5SI76_THET8 Q5SI76_THET8]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dy/2dy1_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dy1 ConSurf].
<div style="clear:both"></div>


===Crystal structure of EF-G-2 from Thermus thermophilus===
==See Also==
 
*[[Elongation factor 3D structures|Elongation factor 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2DY1 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DY1 OCA].
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
[[Category: Chen, L.]]
[[Category: Chen L]]
[[Category: Liu, Z J.]]
[[Category: Liu ZJ]]
[[Category: Murayama, K.]]
[[Category: Murayama K]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Shirouzu M]]
[[Category: Shirouzu, M.]]
[[Category: Takemoto C]]
[[Category: Takemoto, C.]]
[[Category: Terada T]]
[[Category: Terada, T.]]
[[Category: Wang BC]]
[[Category: Wang, B C.]]
[[Category: Wang H]]
[[Category: Wang, H.]]
[[Category: Yokoyama S]]
[[Category: Yokoyama, S.]]
[[Category: Elongation]]
[[Category: Gtp complex]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: Signaling protein]]
[[Category: Structural genomic]]
[[Category: Translation]]
[[Category: Translocation]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 07:33:16 2008''
Retrieved from "https://proteopedia.org/2dy1"