2e5f: Difference between revisions

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New page: left|200px<br /><applet load="2e5f" size="350" color="white" frame="true" align="right" spinBox="true" caption="2e5f, resolution 1.35Å" /> '''Crystal Structure of...
 
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[[Image:2e5f.gif|left|200px]]<br /><applet load="2e5f" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2e5f, resolution 1.35&Aring;" />
'''Crystal Structure of the PH0510 protein from Pyrococcus horikoshii OT3 in complex with phosphate ion'''<br />


==About this Structure==
==Crystal Structure of the PH0510 protein from Pyrococcus horikoshii OT3 in complex with phosphate ion==
2E5F is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii] with <scene name='pdbligand=PO4:'>PO4</scene> and <scene name='pdbligand=EDO:'>EDO</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E5F OCA].  
<StructureSection load='2e5f' size='340' side='right'caption='[[2e5f]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
[[Category: Pyrococcus horikoshii]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2e5f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E5F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E5F FirstGlance]. <br>
[[Category: Kunishima, N.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.35&#8491;</td></tr>
[[Category: Mizutani, H.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e5f OCA], [https://pdbe.org/2e5f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e5f RCSB], [https://www.ebi.ac.uk/pdbsum/2e5f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e5f ProSAT], [https://www.topsan.org/Proteins/RSGI/2e5f TOPSAN]</span></td></tr>
[[Category: EDO]]
</table>
[[Category: PO4]]
== Function ==
[[Category: national project on protein structural and functional analyses]]
[https://www.uniprot.org/uniprot/O58246_PYRHO O58246_PYRHO]  
[[Category: nppsfa]]
== Evolutionary Conservation ==
[[Category: riken structural genomics/proteomics initiative]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: rsgi]]
Check<jmol>
[[Category: structural genomics]]
  <jmolCheckbox>
[[Category: sugar binding protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e5/2e5f_consurf.spt"</scriptWhenChecked>
 
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 14:44:19 2008''
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2e5f ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Kunishima N]]
[[Category: Mizutani H]]
Retrieved from "https://proteopedia.org/2e5f"