2ism: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
 
(12 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2ism.jpg|left|200px]]


{{Structure
==Crystal structure of the putative oxidoreductase (glucose dehydrogenase) (TTHA0570) from thermus theromophilus HB8==
|PDB= 2ism |SIZE=350|CAPTION= <scene name='initialview01'>2ism</scene>, resolution 1.90&Aring;
<StructureSection load='2ism' size='340' side='right'caption='[[2ism]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>
<table><tr><td colspan='2'>[[2ism]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ISM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ISM FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ism FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ism OCA], [https://pdbe.org/2ism PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ism RCSB], [https://www.ebi.ac.uk/pdbsum/2ism PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ism ProSAT], [https://www.topsan.org/Proteins/RSGI/2ism TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ism FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ism OCA], [http://www.ebi.ac.uk/pdbsum/2ism PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ism RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Q5SKS3_THET8 Q5SKS3_THET8]
 
== Evolutionary Conservation ==
'''Crystal structure of the putative oxidoreductase (glucose dehydrogenase) (TTHA0570) from thermus theromophilus HB8'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/is/2ism_consurf.spt"</scriptWhenChecked>
2ISM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ISM OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Thermus thermophilus]]
  </jmolCheckbox>
[[Category: Ebihara, A.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ism ConSurf].
[[Category: Jeyakanthan, J.]]
<div style="clear:both"></div>
[[Category: Kanaujia, S P.]]
__TOC__
[[Category: Kuramitsu, S.]]
</StructureSection>
[[Category: Nakagawa, N.]]
[[Category: Large Structures]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Thermus thermophilus HB8]]
[[Category: Ranjani, C Vasuki.]]
[[Category: Ebihara A]]
[[Category: Sekar, K.]]
[[Category: Jeyakanthan J]]
[[Category: Shimizu, N.]]
[[Category: Kanaujia SP]]
[[Category: Shinkai, A.]]
[[Category: Kuramitsu S]]
[[Category: Shiro, Y.]]
[[Category: Nakagawa N]]
[[Category: Yamamoto, M.]]
[[Category: Sekar K]]
[[Category: Yokoyama, S.]]
[[Category: Shimizu N]]
[[Category: bl41xu spring-8]]
[[Category: Shinkai A]]
[[Category: bladed beta-propellor]]
[[Category: Shiro Y]]
[[Category: glucose dehydrogenase]]
[[Category: Vasuki Ranjani C]]
[[Category: national project on protein structural and functional analyse]]
[[Category: Yamamoto M]]
[[Category: nppsfa]]
[[Category: Yokoyama S]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: structural genomic]]
[[Category: sugar binding protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:48:01 2008''

Latest revision as of 08:53, 25 October 2023

Crystal structure of the putative oxidoreductase (glucose dehydrogenase) (TTHA0570) from thermus theromophilus HB8

2ism, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=2ism&oldid=3925337"