3bdk: Difference between revisions

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[[Image:3bdk.png|left|200px]]


{{STRUCTURE_3bdk|  PDB=3bdk  |  SCENE=  }}
==Crystal Structure of Streptococcus suis mannonate dehydratase complexed with substrate analogue==
 
<StructureSection load='3bdk' size='340' side='right'caption='[[3bdk]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
===Crystal Structure of Streptococcus suis mannonate dehydratase complexed with substrate analogue===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3bdk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_suis Streptococcus suis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BDK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BDK FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DNO:D-MANNOSE'>DNO</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
[[3bdk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_suis Streptococcus suis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BDK OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bdk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bdk OCA], [https://pdbe.org/3bdk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bdk RCSB], [https://www.ebi.ac.uk/pdbsum/3bdk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bdk ProSAT]</span></td></tr>
[[Category: Mannonate dehydratase]]
</table>
== Function ==
[https://www.uniprot.org/uniprot/UXUA_STRSY UXUA_STRSY] Catalyzes the dehydration of D-mannonate (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bd/3bdk_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bdk ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Streptococcus suis]]
[[Category: Streptococcus suis]]
[[Category: Gao, F.]]
[[Category: Gao F]]
[[Category: Gao, G F.]]
[[Category: Gao GF]]
[[Category: Liu, Y W.]]
[[Category: Liu YW]]
[[Category: Peng, H.]]
[[Category: Peng H]]
[[Category: Qi, J X.]]
[[Category: Qi JX]]
[[Category: Zhang, Q M.]]
[[Category: Zhang QM]]
[[Category: Lyase]]
[[Category: Xylose isomerase-like tim barrel]]