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==Crystal structure of YmaH (Hfq) from Bacillus subtilis in complex with an RNA aptamer==
==Crystal structure of YmaH (Hfq) from Bacillus subtilis in complex with an RNA aptamer==
<StructureSection load='3hsb' size='340' side='right' caption='[[3hsb]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='3hsb' size='340' side='right'caption='[[3hsb]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3hsb]] is a 7 chain structure with sequence from [http://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HSB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3HSB FirstGlance]. <br>
<table><tr><td colspan='2'>[[3hsb]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HSB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HSB FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ymaH ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hsb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hsb OCA], [http://pdbe.org/3hsb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3hsb RCSB], [http://www.ebi.ac.uk/pdbsum/3hsb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3hsb ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hsb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hsb OCA], [https://pdbe.org/3hsb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hsb RCSB], [https://www.ebi.ac.uk/pdbsum/3hsb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hsb ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/HFQ_BACSU HFQ_BACSU]] RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs.[HAMAP-Rule:MF_00436]  
[https://www.uniprot.org/uniprot/HFQ_BACSU HFQ_BACSU] RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs.[HAMAP-Rule:MF_00436]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</div>
</div>
<div class="pdbe-citations 3hsb" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 3hsb" style="background-color:#fffaf0;"></div>
==See Also==
*[[Protein Hfq 3D structures|Protein Hfq 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Vibrio subtilis ehrenberg 1835]]
[[Category: Bacillus subtilis]]
[[Category: Baba, S]]
[[Category: Large Structures]]
[[Category: Kawai, G]]
[[Category: Baba S]]
[[Category: Kumasaka, T]]
[[Category: Kawai G]]
[[Category: Nakamura, K]]
[[Category: Kumasaka T]]
[[Category: Someya, T]]
[[Category: Nakamura K]]
[[Category: Protein-rna complex]]
[[Category: Someya T]]
[[Category: Rna binding protein-rna complex]]
[[Category: Rna-binding]]
[[Category: Sm-like motif]]
[[Category: Stress response]]
Retrieved from "https://proteopedia.org/3hsb"