2nys: Difference between revisions

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[[Image:2nys.gif|left|200px]]


<!--
==X-ray Crystal Structure of Protein AGR_C_3712 from Agrobacterium tumefaciens. Northeast Structural Genomics Consortium Target AtR88.==
The line below this paragraph, containing "STRUCTURE_2nys", creates the "Structure Box" on the page.
<StructureSection load='2nys' size='340' side='right'caption='[[2nys]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2nys]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NYS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NYS FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_2nys|  PDB=2nys  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nys FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nys OCA], [https://pdbe.org/2nys PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nys RCSB], [https://www.ebi.ac.uk/pdbsum/2nys PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nys ProSAT], [https://www.topsan.org/Proteins/NESGC/2nys TOPSAN]</span></td></tr>
 
</table>
'''X-ray Crystal Structure of Protein AGR_C_3712 from Agrobacterium tumefaciens. Northeast Structural Genomics Consortium Target AtR88.'''
== Function ==
 
[https://www.uniprot.org/uniprot/Q8U561_AGRFC Q8U561_AGRFC]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2NYS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NYS OCA].  
Check<jmol>
[[Category: Agrobacterium tumefaciens]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ny/2nys_consurf.spt"</scriptWhenChecked>
[[Category: Abashidze, M.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Acton, T B.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Cunningham, K.]]
  </jmolCheckbox>
[[Category: Hunt, J F.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nys ConSurf].
[[Category: Ma, L C.]]
<div style="clear:both"></div>
[[Category: Montelione, G T.]]
__TOC__
[[Category: NESG, Northeast Structural Genomics Consortium.]]
</StructureSection>
[[Category: Nwosu, C.]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Seetharaman, J.]]
[[Category: Large Structures]]
[[Category: Tong, L.]]
[[Category: Abashidze M]]
[[Category: Vorobiev, S M.]]
[[Category: Acton TB]]
[[Category: Xiao, R.]]
[[Category: Cunningham K]]
[[Category: Zhao, L.]]
[[Category: Hunt JF]]
[[Category: Agr_c_3712]]
[[Category: Ma LC]]
[[Category: Atr88]]
[[Category: Montelione GT]]
[[Category: Nesg]]
[[Category: Nwosu C]]
[[Category: Northeast structural genomics consortium]]
[[Category: Seetharaman J]]
[[Category: Protein structure initiative]]
[[Category: Tong L]]
[[Category: Psi-2]]
[[Category: Vorobiev SM]]
[[Category: Sspb]]
[[Category: Xiao R]]
[[Category: Stringent starvation protein b]]
[[Category: Zhao L]]
[[Category: Structural genomic]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 10:05:28 2008''
Retrieved from "https://proteopedia.org/2nys"