2ols: Difference between revisions

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[[Image:2ols.gif|left|200px]]


{{Structure
==The crystal structure of the phosphoenolpyruvate synthase from Neisseria meningitidis==
|PDB= 2ols |SIZE=350|CAPTION= <scene name='initialview01'>2ols</scene>, resolution 2.40&Aring;
<StructureSection load='2ols' size='340' side='right'caption='[[2ols]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[2ols]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis_MC58 Neisseria meningitidis MC58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OLS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OLS FirstGlance]. <br>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Pyruvate,_water_dikinase Pyruvate, water dikinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.9.2 2.7.9.2] </span>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
|GENE= ppsA, NMB0618 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=491 Neisseria meningitidis serogroup B])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ols FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ols OCA], [https://pdbe.org/2ols PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ols RCSB], [https://www.ebi.ac.uk/pdbsum/2ols PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ols ProSAT], [https://www.topsan.org/Proteins/MCSG/2ols TOPSAN]</span></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00391 PEP-utilizers], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01326 PPDK_N], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02896 PEP-utilizers_C], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK06464 PRK06464]</span>
</table>
|RELATEDENTRY=
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ols FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ols OCA], [http://www.ebi.ac.uk/pdbsum/2ols PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ols RCSB]</span>
[https://www.uniprot.org/uniprot/PPSA_NEIMB PPSA_NEIMB] Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate.
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''The crystal structure of the phosphoenolpyruvate synthase from Neisseria meningitidis'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ol/2ols_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
2OLS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Neisseria_meningitidis_serogroup_b Neisseria meningitidis serogroup b]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OLS OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Neisseria meningitidis serogroup b]]
  </jmolCheckbox>
[[Category: Pyruvate, water dikinase]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ols ConSurf].
[[Category: Single protein]]
<div style="clear:both"></div>
[[Category: Bargassa, M.]]
__TOC__
[[Category: Duggan, E.]]
</StructureSection>
[[Category: Joachimiak, A.]]
[[Category: Large Structures]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Neisseria meningitidis MC58]]
[[Category: Zhang, R.]]
[[Category: Bargassa M]]
[[Category: mcsg]]
[[Category: Duggan E]]
[[Category: midwest center for structural genomic]]
[[Category: Joachimiak A]]
[[Category: neisseria meningitidi]]
[[Category: Zhang R]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: structural genomic]]
[[Category: the phosphoenolpyruvate synthase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:19:39 2008''