1dhy: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:1dhy.png|left|200px]]


<!--
==KKS102 BPHC ENZYME==
The line below this paragraph, containing "STRUCTURE_1dhy", creates the "Structure Box" on the page.
<StructureSection load='1dhy' size='340' side='right'caption='[[1dhy]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1dhy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_sp. Pseudomonas sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DHY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DHY FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
{{STRUCTURE_1dhy| PDB=1dhy |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dhy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dhy OCA], [https://pdbe.org/1dhy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dhy RCSB], [https://www.ebi.ac.uk/pdbsum/1dhy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dhy ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/BPHC_PSES1 BPHC_PSES1]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dh/1dhy_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dhy ConSurf].
<div style="clear:both"></div>


===KKS102 BPHC ENZYME===
==See Also==
 
*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_8636975}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 8636975 is the PubMed ID number.
[[Category: Pseudomonas sp]]
-->
[[Category: Mitsui Y]]
{{ABSTRACT_PUBMED_8636975}}
[[Category: Narita H]]
 
[[Category: Senda T]]
==About this Structure==
[[Category: Sugiyama K]]
1DHY is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_sp. Pseudomonas sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DHY OCA].
 
==Reference==
Three-dimensional structures of free form and two substrate complexes of an extradiol ring-cleavage type dioxygenase, the BphC enzyme from Pseudomonas sp. strain KKS102., Senda T, Sugiyama K, Narita H, Yamamoto T, Kimbara K, Fukuda M, Sato M, Yano K, Mitsui Y, J Mol Biol. 1996 Feb 9;255(5):735-52. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8636975 8636975]
[[Category: Biphenyl-2,3-diol 1,2-dioxygenase]]
[[Category: Pseudomonas sp.]]
[[Category: Single protein]]
[[Category: Mitsui, Y.]]
[[Category: Narita, H.]]
[[Category: Senda, T.]]
[[Category: Sugiyama, K.]]
[[Category: Extradiol type dioxygenase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 23:05:12 2008''

Latest revision as of 06:53, 7 February 2024

KKS102 BPHC ENZYME

1dhy, resolution 2.30Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=1dhy&oldid=4041916"