1fa2: Difference between revisions

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{{Seed}}
[[Image:1fa2.png|left|200px]]


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==CRYSTAL STRUCTURE OF BETA-AMYLASE FROM SWEET POTATO==
The line below this paragraph, containing "STRUCTURE_1fa2", creates the "Structure Box" on the page.
<StructureSection load='1fa2' size='340' side='right'caption='[[1fa2]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1fa2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ipomoea_batatas Ipomoea batatas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FA2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1FA2 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DTT:2,3-DIHYDROXY-1,4-DITHIOBUTANE'>DTT</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900048:2-deoxy-maltose'>PRD_900048</scene>, <scene name='pdbligand=RR7:2-deoxy-beta-D-arabino-hexopyranose'>RR7</scene></td></tr>
{{STRUCTURE_1fa2|  PDB=1fa2 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1fa2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fa2 OCA], [https://pdbe.org/1fa2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1fa2 RCSB], [https://www.ebi.ac.uk/pdbsum/1fa2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1fa2 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/AMYB_IPOBA AMYB_IPOBA]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fa/1fa2_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1fa2 ConSurf].
<div style="clear:both"></div>


===CRYSTAL STRUCTURE OF BETA-AMYLASE FROM SWEET POTATO===
==See Also==
 
*[[Amylase 3D structures|Amylase 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_7777485}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 7777485 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_7777485}}
 
==About this Structure==
1FA2 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Ipomoea_batatas Ipomoea batatas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FA2 OCA].
 
==Reference==
Crystallization, molecular replacement solution, and refinement of tetrameric beta-amylase from sweet potato., Cheong CG, Eom SH, Chang C, Shin DH, Song HK, Min K, Moon JH, Kim KK, Hwang KY, Suh SW, Proteins. 1995 Feb;21(2):105-17. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/7777485 7777485]
[[Category: Beta-amylase]]
[[Category: Ipomoea batatas]]
[[Category: Ipomoea batatas]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Cheong, C G.]]
[[Category: Cheong CG]]
[[Category: Lee, B I.]]
[[Category: Lee BI]]
[[Category: Suh, S W.]]
[[Category: Suh SW]]
[[Category: Tim barrel]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 02:56:24 2008''
Retrieved from "https://proteopedia.org/1fa2"