1mld: Difference between revisions

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{{Seed}}
[[Image:1mld.png|left|200px]]


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==REFINED STRUCTURE OF MITOCHONDRIAL MALATE DEHYDROGENASE FROM PORCINE HEART AND THE CONSENSUS STRUCTURE FOR DICARBOXYLIC ACID OXIDOREDUCTASES==
The line below this paragraph, containing "STRUCTURE_1mld", creates the "Structure Box" on the page.
<StructureSection load='1mld' size='340' side='right'caption='[[1mld]], [[Resolution|resolution]] 1.83&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1mld]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. The October 2012 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Citric Acid Cycle''  by David Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2012_10 10.2210/rcsb_pdb/mom_2012_10]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MLD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MLD FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.83&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene></td></tr>
{{STRUCTURE_1mld|  PDB=1mld |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1mld FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mld OCA], [https://pdbe.org/1mld PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1mld RCSB], [https://www.ebi.ac.uk/pdbsum/1mld PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1mld ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/MDHM_PIG MDHM_PIG]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ml/1mld_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1mld ConSurf].
<div style="clear:both"></div>


===REFINED STRUCTURE OF MITOCHONDRIAL MALATE DEHYDROGENASE FROM PORCINE HEART AND THE CONSENSUS STRUCTURE FOR DICARBOXYLIC ACID OXIDOREDUCTASES===
==See Also==
 
*[[Malate Dehydrogenase 3D structures|Malate Dehydrogenase 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_8117664}}, adds the Publication Abstract to the page
[[Category: Citric Acid Cycle]]
(as it appears on PubMed at http://www.pubmed.gov), where 8117664 is the PubMed ID number.
[[Category: Large Structures]]
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[[Category: RCSB PDB Molecule of the Month]]
{{ABSTRACT_PUBMED_8117664}}
 
==About this Structure==
1MLD is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MLD OCA].
 
==Reference==
Refined crystal structure of mitochondrial malate dehydrogenase from porcine heart and the consensus structure for dicarboxylic acid oxidoreductases., Gleason WB, Fu Z, Birktoft J, Banaszak L, Biochemistry. 1994 Mar 1;33(8):2078-88. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8117664 8117664]
[[Category: Malate dehydrogenase]]
[[Category: Single protein]]
[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
[[Category: Banaszak, L J.]]
[[Category: Banaszak LJ]]
[[Category: Birktoft, J J.]]
[[Category: Birktoft JJ]]
[[Category: Fu, Z.]]
[[Category: Fu Z]]
[[Category: Gleason, W B.]]
[[Category: Gleason WB]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jul  3 00:16:01 2008''