1rr7: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:1rr7.png|left|200px]]


<!--
==Crystal structure of the Middle Operon Regulator protein of Bacteriophage Mu==
The line below this paragraph, containing "STRUCTURE_1rr7", creates the "Structure Box" on the page.
<StructureSection load='1rr7' size='340' side='right'caption='[[1rr7]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1rr7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_Mu Escherichia virus Mu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RR7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RR7 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene></td></tr>
{{STRUCTURE_1rr7|  PDB=1rr7  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rr7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rr7 OCA], [https://pdbe.org/1rr7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rr7 RCSB], [https://www.ebi.ac.uk/pdbsum/1rr7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rr7 ProSAT]</span></td></tr>
 
</table>
===Crystal structure of the Middle Operon Regulator protein of Bacteriophage Mu===
== Function ==
 
[https://www.uniprot.org/uniprot/MOR_BPMU MOR_BPMU] Activator of the Pm promoter, which controls middle genes expression. Activation of Pm allows expression of protein C necessary for late gene expression. In addition to Mor binding, activation of Pm might require the interaction of Mor with the C-terminus of host RNAP subunits RpoA and RpoH.<ref>PMID:2173258</ref> <ref>PMID:8790343</ref>
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_14729670}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 14729670 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rr/1rr7_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_14729670}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1RR7 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_mu Enterobacteria phage mu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RR7 OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1rr7 ConSurf].
 
<div style="clear:both"></div>
==Reference==
== References ==
Crystal structure of the Mor protein of bacteriophage Mu, a member of the Mor/C family of transcription activators., Kumaraswami M, Howe MM, Park HW, J Biol Chem. 2004 Apr 16;279(16):16581-90. Epub 2004 Jan 16. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/14729670 14729670]
<references/>
[[Category: Enterobacteria phage mu]]
__TOC__
[[Category: Single protein]]
</StructureSection>
[[Category: Howe, M M.]]
[[Category: Escherichia virus Mu]]
[[Category: Kumaraswami, M.]]
[[Category: Large Structures]]
[[Category: Park, H W.]]
[[Category: Howe MM]]
[[Category: Mor]]
[[Category: Kumaraswami M]]
 
[[Category: Park HW]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 02:20:23 2008''

Latest revision as of 08:25, 14 February 2024

Crystal structure of the Middle Operon Regulator protein of Bacteriophage Mu

1rr7, resolution 2.20Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA