1scs: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:1scs.png|left|200px]]


<!--
==HIGH-RESOLUTION STRUCTURES OF SINGLE-METAL-SUBSTITUTED CONCANAVALIN A: THE CO,CA-PROTEIN AT 1.6 ANGSTROMS AND THE NI,CA-PROTEIN AT 2.0 ANGSTROMS==
The line below this paragraph, containing "STRUCTURE_1scs", creates the "Structure Box" on the page.
<StructureSection load='1scs' size='340' side='right'caption='[[1scs]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1scs]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Canavalia_ensiformis Canavalia ensiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SCS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SCS FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene></td></tr>
{{STRUCTURE_1scs| PDB=1scs |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1scs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1scs OCA], [https://pdbe.org/1scs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1scs RCSB], [https://www.ebi.ac.uk/pdbsum/1scs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1scs ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/CONA_CANEN CONA_CANEN] D-mannose specific lectin.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sc/1scs_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1scs ConSurf].
<div style="clear:both"></div>


===HIGH-RESOLUTION STRUCTURES OF SINGLE-METAL-SUBSTITUTED CONCANAVALIN A: THE CO,CA-PROTEIN AT 1.6 ANGSTROMS AND THE NI,CA-PROTEIN AT 2.0 ANGSTROMS===
==See Also==
 
*[[Concanavalin 3D structures|Concanavalin 3D structures]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_15299372}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 15299372 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_15299372}}
 
==About this Structure==
1SCS is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Canavalia_ensiformis Canavalia ensiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SCS OCA].
 
==Reference==
<ref group="xtra">PMID:15299372</ref><references group="xtra"/>
[[Category: Canavalia ensiformis]]
[[Category: Canavalia ensiformis]]
[[Category: Dauter, Z.]]
[[Category: Large Structures]]
[[Category: Emmerich, C.]]
[[Category: Dauter Z]]
[[Category: Harrop, S J.]]
[[Category: Emmerich C]]
[[Category: Helliwell, J R.]]
[[Category: Harrop SJ]]
[[Category: Kalb, A J.]]
[[Category: Helliwell JR]]
[[Category: Naismith, J H.]]
[[Category: Kalb AJ]]
[[Category: Raftery, J.]]
[[Category: Naismith JH]]
[[Category: Redshaw, M.]]
[[Category: Raftery J]]
[[Category: Wilson, K S.]]
[[Category: Redshaw M]]
[[Category: Yariv, J.]]
[[Category: Wilson KS]]
 
[[Category: Yariv J]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 06:53:23 2009''
Retrieved from "https://proteopedia.org/1scs"