2ewv: Difference between revisions

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{{Seed}}
[[Image:2ewv.png|left|200px]]


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==Crystal Structure of the Pilus Retraction Motor PilT and Bound ADP==
The line below this paragraph, containing "STRUCTURE_2ewv", creates the "Structure Box" on the page.
<StructureSection load='2ewv' size='340' side='right'caption='[[2ewv]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2ewv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EWV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EWV FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene></td></tr>
{{STRUCTURE_2ewv|  PDB=2ewv  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ewv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ewv OCA], [https://pdbe.org/2ewv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ewv RCSB], [https://www.ebi.ac.uk/pdbsum/2ewv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ewv ProSAT]</span></td></tr>
 
</table>
===Crystal Structure of the Pilus Retraction Motor PilT and Bound ADP===
== Function ==
 
[https://www.uniprot.org/uniprot/O66950_AQUAE O66950_AQUAE]  
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_17355871}}, adds the Publication Abstract to the page
Check<jmol>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ew/2ewv_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_17355871}}
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    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
2EWV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus_vf5 Aquifex aeolicus vf5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EWV OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ewv ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Crystal structures of the pilus retraction motor PilT suggest large domain movements and subunit cooperation drive motility., Satyshur KA, Worzalla GA, Meyer LS, Heiniger EK, Aukema KG, Misic AM, Forest KT, Structure. 2007 Mar;15(3):363-76. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17355871 17355871]
</StructureSection>
 
[[Category: Aquifex aeolicus VF5]]
The pilus-retraction protein PilT: ultrastructure of the biological assembly., Forest KT, Satyshur KA, Worzalla GA, Hansen JK, Herdendorf TJ, Acta Crystallogr D Biol Crystallogr. 2004 May;60(Pt 5):978-82. Epub 2004, Apr 21. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15103158 15103158]
[[Category: Large Structures]]
[[Category: Aquifex aeolicus vf5]]
[[Category: Forest KT]]
[[Category: Single protein]]
[[Category: Satyshur KA]]
[[Category: Forest, K T.]]
[[Category: Satyshur, K A.]]
[[Category: Atpase]]
[[Category: Hexameric pilt]]
[[Category: Pilus retraction motor]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 03:04:47 2008''