2i6a: Difference between revisions

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{{Seed}}
[[Image:2i6a.png|left|200px]]


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==Human Adenosine Kinase in Complex With 5'-Deoxy-5-Iodotubercidin==
The line below this paragraph, containing "STRUCTURE_2i6a", creates the "Structure Box" on the page.
<StructureSection load='2i6a' size='340' side='right'caption='[[2i6a]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2i6a]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I6A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I6A FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5I5:7-(5-DEOXY-BETA-D-RIBOFURANOSYL)-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-4-AMINE'>5I5</scene></td></tr>
{{STRUCTURE_2i6a| PDB=2i6a |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i6a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i6a OCA], [https://pdbe.org/2i6a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i6a RCSB], [https://www.ebi.ac.uk/pdbsum/2i6a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i6a ProSAT]</span></td></tr>
</table>
== Disease ==
[https://www.uniprot.org/uniprot/ADK_HUMAN ADK_HUMAN] Defects in ADK are the cause of hypermethioninemia due to adenosine kinase deficiency (HMAKD) [MIM:[https://omim.org/entry/614300 614300]. A metabolic disorder characterized by global developmental delay, early-onset seizures, mild dysmorphic features, and characteristic biochemical anomalies, including persistent hypermethioninemia with increased levels of S-adenosylmethionine and S-adenosylhomocysteine. Homocysteine levels are typically normal.<ref>PMID:21963049</ref>
== Function ==
[https://www.uniprot.org/uniprot/ADK_HUMAN ADK_HUMAN] ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i6/2i6a_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i6a ConSurf].
<div style="clear:both"></div>


===Human Adenosine Kinase in Complex With 5'-Deoxy-5-Iodotubercidin===
==See Also==
 
*[[Adenosine kinase 3D structures|Adenosine kinase 3D structures]]
 
*[[Adenylate kinase 3D structures|Adenylate kinase 3D structures]]
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== References ==
The line below this paragraph, {{ABSTRACT_PUBMED_17154503}}, adds the Publication Abstract to the page
<references/>
(as it appears on PubMed at http://www.pubmed.gov), where 17154503 is the PubMed ID number.
__TOC__
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</StructureSection>
{{ABSTRACT_PUBMED_17154503}}
 
==About this Structure==
2I6A is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I6A OCA].
 
==Reference==
<ref group="xtra">PMID:17154503</ref><references group="xtra"/>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Muchmore, S W.]]
[[Category: Large Structures]]
[[Category: 5'-deoxy-5-iodotubercidin]]
[[Category: Muchmore SW]]
[[Category: Protein-ligand complex]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 00:59:24 2009''

Latest revision as of 09:01, 21 February 2024

Human Adenosine Kinase in Complex With 5'-Deoxy-5-Iodotubercidin

2i6a, resolution 2.20Å

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