2ifm: Difference between revisions

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{{Seed}}
[[Image:2ifm.png|left|200px]]


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==PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA==
The line below this paragraph, containing "STRUCTURE_2ifm", creates the "Structure Box" on the page.
<StructureSection load='2ifm' size='340' side='right'caption='[[2ifm]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2ifm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_phage_Xf Xanthomonas phage Xf]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IFM FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Fiber diffraction, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ifm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ifm OCA], [https://pdbe.org/2ifm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ifm RCSB], [https://www.ebi.ac.uk/pdbsum/2ifm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ifm ProSAT]</span></td></tr>
{{STRUCTURE_2ifm|  PDB=2ifm  |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/CAPSD_BPPF1 CAPSD_BPPF1] Self assembles to form a helical capsid wrapping up the viral genomic DNA. The capsid displays a filamentous structure with a length of 760-1950 nm and a width of 6-8 nm. The virion assembly and budding take place at the host inner membrane (By similarity).


===PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA===
==See Also==
 
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_15299811}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 15299811 is the PubMed ID number.
[[Category: Xanthomonas phage Xf]]
-->
[[Category: Marvin DA]]
{{ABSTRACT_PUBMED_15299811}}
 
==About this Structure==
2IFM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Xanthomonas_phage_xf Xanthomonas phage xf]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFM OCA].
 
==Reference==
Pf1 filamentous bacteriophage: refinement of a molecular model by simulated annealing using 3.3 A resolution X-ray fibre diffraction data., Gonzalez A, Nave C, Marvin DA, Acta Crystallogr D Biol Crystallogr. 1995 Sep 1;51(Pt 5):792-804. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15299811 15299811]
[[Category: Single protein]]
[[Category: Xanthomonas phage xf]]
[[Category: Marvin, D A.]]
[[Category: Helical virus]]
[[Category: Virus coat protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 10:38:49 2008''
Retrieved from "https://proteopedia.org/2ifm"