2p5z: Difference between revisions

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New page: left|200px<br /><applet load="2p5z" size="350" color="white" frame="true" align="right" spinBox="true" caption="2p5z, resolution 2.60Å" /> '''Crystal structure of...
 
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[[Image:2p5z.jpg|left|200px]]<br /><applet load="2p5z" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2p5z, resolution 2.60&Aring;" />
'''Crystal structure of the N-terminal domain of E. coli CFT073 c3393, including Pfam DUF586'''<br />


==About this Structure==
==The E. coli c3393 protein is a component of the type VI secretion system and exhibits structural similarity to T4 bacteriophage tail proteins gp27 and gp5==
2P5Z is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_o6 Escherichia coli o6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P5Z OCA].  
<StructureSection load='2p5z' size='340' side='right'caption='[[2p5z]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
[[Category: Escherichia coli o6]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2p5z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_O6 Escherichia coli O6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P5Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P5Z FirstGlance]. <br>
[[Category: Almo, S.C.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
[[Category: Bonanno, J.B.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p5z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p5z OCA], [https://pdbe.org/2p5z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p5z RCSB], [https://www.ebi.ac.uk/pdbsum/2p5z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p5z ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2p5z TOPSAN]</span></td></tr>
[[Category: Burley, S.K.]]
</table>
[[Category: Freeman, J.C.]]
== Function ==
[[Category: Gheyi, T.]]
[https://www.uniprot.org/uniprot/A0A0H2VBP9_ECOL6 A0A0H2VBP9_ECOL6]  
[[Category: Lau, C.]]
== Evolutionary Conservation ==
[[Category: Maletic, M.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
Check<jmol>
[[Category: Ramagopal, U.A.]]
  <jmolCheckbox>
[[Category: Sauder, J.M.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p5/2p5z_consurf.spt"</scriptWhenChecked>
[[Category: Sridhar, V.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Toro, R.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: new york structural genomix research consortium]]
  </jmolCheckbox>
[[Category: nysgxrc]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p5z ConSurf].
[[Category: protein structure initiative]]
<div style="clear:both"></div>
[[Category: psi-2]]
__TOC__
[[Category: structural genomics]]
</StructureSection>
[[Category: unknown function]]
[[Category: Escherichia coli O6]]
 
[[Category: Large Structures]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 21:20:36 2008''
[[Category: Almo SC]]
[[Category: Bonanno JB]]
[[Category: Burley SK]]
[[Category: Freeman JC]]
[[Category: Gheyi T]]
[[Category: Lau C]]
[[Category: Maletic M]]
[[Category: Ramagopal UA]]
[[Category: Sauder JM]]
[[Category: Sridhar V]]
[[Category: Toro R]]
Retrieved from "https://proteopedia.org/2p5z"