2pma: Difference between revisions

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[[Image:2pma.gif|left|200px]]


{{Structure
==Structural Genomics, the crystal structure of a protein Lpg0085 with unknown function (DUF785) from Legionella pneumophila subsp. pneumophila str. Philadelphia 1.==
|PDB= 2pma |SIZE=350|CAPTION= <scene name='initialview01'>2pma</scene>, resolution 1.89&Aring;
<StructureSection load='2pma' size='340' side='right'caption='[[2pma]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>
<table><tr><td colspan='2'>[[2pma]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 Legionella pneumophila subsp. pneumophila str. Philadelphia 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PMA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PMA FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.89&#8491;</td></tr>
|GENE= lpg0085 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272624 Legionella pneumophila subsp. pneumophila str. Philadelphia 1])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4067 COG4067]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pma FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pma OCA], [https://pdbe.org/2pma PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pma RCSB], [https://www.ebi.ac.uk/pdbsum/2pma PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pma ProSAT], [https://www.topsan.org/Proteins/MCSG/2pma TOPSAN]</span></td></tr>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pma FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pma OCA], [http://www.ebi.ac.uk/pdbsum/2pma PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2pma RCSB]</span>
</table>
}}
== Function ==
 
[https://www.uniprot.org/uniprot/Q5ZZC6_LEGPH Q5ZZC6_LEGPH]
'''Structural Genomics, the crystal structure of a protein Lpg0085 with unknown function (DUF785) from Legionella pneumophila subsp. pneumophila str. Philadelphia 1.'''
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
2PMA is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Legionella_pneumophila_subsp._pneumophila_str._philadelphia_1 Legionella pneumophila subsp. pneumophila str. philadelphia 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PMA OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pm/2pma_consurf.spt"</scriptWhenChecked>
[[Category: Legionella pneumophila subsp. pneumophila str. philadelphia 1]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Joachimiak, A.]]
  </jmolCheckbox>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pma ConSurf].
[[Category: Moy, S.]]
<div style="clear:both"></div>
[[Category: Mulligan, R.]]
__TOC__
[[Category: Tan, K.]]
</StructureSection>
[[Category: apc86035 2]]
[[Category: Large Structures]]
[[Category: duf785]]
[[Category: Legionella pneumophila subsp. pneumophila str. Philadelphia 1]]
[[Category: legionella pneumophila subsp. pneumophila str. philadelphia 1]]
[[Category: Joachimiak A]]
[[Category: mcsg]]
[[Category: Moy S]]
[[Category: midwest center for structural genomic]]
[[Category: Mulligan R]]
[[Category: protein lpg0085]]
[[Category: Tan K]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:40:07 2008''

Latest revision as of 09:10, 21 February 2024

Structural Genomics, the crystal structure of a protein Lpg0085 with unknown function (DUF785) from Legionella pneumophila subsp. pneumophila str. Philadelphia 1.

2pma, resolution 1.89Å

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