3c1o: Difference between revisions

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{{Seed}}
[[Image:3c1o.png|left|200px]]


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==The multiple phenylpropene synthases in both Clarkia breweri and Petunia hybrida represent two distinct lineages==
The line below this paragraph, containing "STRUCTURE_3c1o", creates the "Structure Box" on the page.
<StructureSection load='3c1o' size='340' side='right'caption='[[3c1o]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3c1o]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Clarkia_breweri Clarkia breweri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C1O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C1O FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr>
{{STRUCTURE_3c1o|  PDB=3c1o  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c1o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c1o OCA], [https://pdbe.org/3c1o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c1o RCSB], [https://www.ebi.ac.uk/pdbsum/3c1o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c1o ProSAT]</span></td></tr>
 
</table>
===The multiple phenylpropene synthases in both Clarkia breweri and Petunia hybrida represent two distinct lineages===
== Function ==
 
[https://www.uniprot.org/uniprot/EGS1_CLABR EGS1_CLABR]
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_18208524}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 18208524 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c1/3c1o_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_18208524}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
3C1O is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Clarkia_breweri Clarkia breweri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C1O OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c1o ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
The multiple phenylpropene synthases in both Clarkia breweri and Petunia hybrida represent two distinct protein lineages., Koeduka T, Louie GV, Orlova I, Kish CM, Ibdah M, Wilkerson CG, Bowman ME, Baiga TJ, Noel JP, Dudareva N, Pichersky E, Plant J. 2008 May;54(3):362-74. Epub 2008 Jan 16. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18208524 18208524]
</StructureSection>
[[Category: Clarkia breweri]]
[[Category: Clarkia breweri]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Bowman, M E.]]
[[Category: Bowman ME]]
[[Category: Louie, G V.]]
[[Category: Louie GV]]
[[Category: Noel, J P.]]
[[Category: Noel JP]]
[[Category: Eugenol]]
[[Category: Oxidoreductase]]
[[Category: Phenylpropene]]
[[Category: Pip reductase]]
[[Category: Short-chain dehydrogenase/reductase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 13:09:24 2008''
Retrieved from "https://proteopedia.org/3c1o"