3dhz: Difference between revisions

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[[Image:3dhz.jpg|left|200px]]


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==Apo (iron free) structure of C. ammoniagenes R2 protein==
The line below this paragraph, containing "STRUCTURE_3dhz", creates the "Structure Box" on the page.
<StructureSection load='3dhz' size='340' side='right'caption='[[3dhz]], [[Resolution|resolution]] 1.63&Aring;' scene=''>
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== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3dhz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_ammoniagenes Corynebacterium ammoniagenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DHZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DHZ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.63&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene></td></tr>
{{STRUCTURE_3dhz| PDB=3dhz |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dhz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dhz OCA], [https://pdbe.org/3dhz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dhz RCSB], [https://www.ebi.ac.uk/pdbsum/3dhz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dhz ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/O69274_CORAM O69274_CORAM] Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity).[PIRNR:PIRNR000355]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dh/3dhz_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dhz ConSurf].
<div style="clear:both"></div>


===Apo (iron free) structure of C. ammoniagenes R2 protein===
==See Also==
 
*[[Ribonucleotide reductase 3D structures|Ribonucleotide reductase 3D structures]]
 
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{{ABSTRACT_PUBMED_15196041}}
 
==About this Structure==
3DHZ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Corynebacterium_ammoniagenes Corynebacterium ammoniagenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DHZ OCA].
 
==Reference==
Structural and mutational studies of the carboxylate cluster in iron-free ribonucleotide reductase R2., Andersson ME, Hogbom M, Rinaldo-Matthis A, Blodig W, Liang Y, Persson BO, Sjoberg BM, Su XD, Nordlund P, Biochemistry. 2004 Jun 22;43(24):7966-72. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15196041 15196041]
[[Category: Corynebacterium ammoniagenes]]
[[Category: Corynebacterium ammoniagenes]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Hogbom, M.]]
[[Category: Hogbom M]]
[[Category: Nordlund, P.]]
[[Category: Nordlund P]]
[[Category: Hydrogen bond]]
[[Category: Metal binding protein]]
[[Category: Metal free]]
[[Category: Ribonucleotide reductase]]
 
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Retrieved from "https://proteopedia.org/3dhz"