3dil: Difference between revisions

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{{Seed}}
[[Image:3dil.png|left|200px]]


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==Crystal structure of the Thermotoga maritima lysine riboswitch bound to lysine==
The line below this paragraph, containing "STRUCTURE_3dil", creates the "Structure Box" on the page.
<StructureSection load='3dil' size='340' side='right'caption='[[3dil]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3dil]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DIL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DIL FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=CCC:CYTIDINE-5-PHOSPHATE-2,3-CYCLIC+PHOSPHATE'>CCC</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=LYS:LYSINE'>LYS</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
{{STRUCTURE_3dil|  PDB=3dil  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dil FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dil OCA], [https://pdbe.org/3dil PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dil RCSB], [https://www.ebi.ac.uk/pdbsum/3dil PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dil ProSAT]</span></td></tr>
 
</table>
===Crystal structure of the Thermotoga maritima lysine riboswitch bound to lysine===
__TOC__
 
</StructureSection>
 
[[Category: Large Structures]]
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[[Category: Thermotoga maritima]]
The line below this paragraph, {{ABSTRACT_PUBMED_18784651}}, adds the Publication Abstract to the page
[[Category: Serganov AA]]
(as it appears on PubMed at http://www.pubmed.gov), where 18784651 is the PubMed ID number.
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{{ABSTRACT_PUBMED_18784651}}
 
==About this Structure==
3DIL is a [[Single protein]] structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DIL OCA].  
 
==Reference==
Structural insights into amino acid binding and gene control by a lysine riboswitch., Serganov A, Huang L, Patel DJ, Nature. 2008 Oct 30;455(7217):1263-7. Epub 2008 Sep 10. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18784651 18784651]
[[Category: Single protein]]
[[Category: Serganov, A A.]]
[[Category: Lysine]]
[[Category: Riboswitch]]
[[Category: Rna]]
 
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Retrieved from "https://proteopedia.org/3dil"