3e3v: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3e3v.png|left|200px]]


<!--
==Crystal structure of RecX from Lactobacillus salivarius==
The line below this paragraph, containing "STRUCTURE_3e3v", creates the "Structure Box" on the page.
<StructureSection load='3e3v' size='340' side='right'caption='[[3e3v]], [[Resolution|resolution]] 2.04&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3e3v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ligilactobacillus_salivarius_UCC118 Ligilactobacillus salivarius UCC118]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E3V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E3V FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.04&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e3v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e3v OCA], [https://pdbe.org/3e3v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e3v RCSB], [https://www.ebi.ac.uk/pdbsum/3e3v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e3v ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3e3v TOPSAN]</span></td></tr>
{{STRUCTURE_3e3v|  PDB=3e3v  |  SCENE=  }}
</table>
 
== Function ==
===Crystal structure of RecX from Lactobacillus salivarius===
[https://www.uniprot.org/uniprot/Q1WV04_LIGS1 Q1WV04_LIGS1] Modulates RecA activity.[ARBA:ARBA00003529][HAMAP-Rule:MF_01114]
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
3E3V is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Lactobacillus_salivarius_ucc118 Lactobacillus salivarius ucc118]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E3V OCA].  
  <jmolCheckbox>
[[Category: Lactobacillus salivarius ucc118]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e3/3e3v_consurf.spt"</scriptWhenChecked>
[[Category: Agarwal, R.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Burley, S K.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
  </jmolCheckbox>
[[Category: Swaminathan, S.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e3v ConSurf].
[[Category: 10123p]]
<div style="clear:both"></div>
[[Category: Crystal structure]]
__TOC__
[[Category: New york sgx research center for structural genomic]]
</StructureSection>
[[Category: Nysgxrc]]
[[Category: Large Structures]]
[[Category: Protein structure initiative]]
[[Category: Ligilactobacillus salivarius UCC118]]
[[Category: Psi-ii]]
[[Category: Agarwal R]]
[[Category: Recombination]]
[[Category: Burley SK]]
[[Category: Recx]]
[[Category: Swaminathan S]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 13:58:09 2008''