3fi8: Difference between revisions

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{{Seed}}
[[Image:3fi8.jpg|left|200px]]


<!--
==Crystal structure of choline kinase from Plasmodium Falciparum, PF14_0020==
The line below this paragraph, containing "STRUCTURE_3fi8", creates the "Structure Box" on the page.
<StructureSection load='3fi8' size='340' side='right'caption='[[3fi8]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3fi8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum_3D7 Plasmodium falciparum 3D7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FI8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FI8 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=OPE:PHOSPHORIC+ACID+MONO-(2-AMINO-ETHYL)+ESTER'>OPE</scene></td></tr>
{{STRUCTURE_3fi8| PDB=3fi8 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fi8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fi8 OCA], [https://pdbe.org/3fi8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fi8 RCSB], [https://www.ebi.ac.uk/pdbsum/3fi8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fi8 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q8IM71_PLAF7 Q8IM71_PLAF7]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fi/3fi8_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fi8 ConSurf].
<div style="clear:both"></div>


===Crystal structure of choline kinase from Plasmodium Falciparum, PF14_0020===
==See Also==
 
*[[Choline kinase 3D structures|Choline kinase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3FI8 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Plasmodium_falciparum_3d7 Plasmodium falciparum 3d7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FI8 OCA].
[[Category: Large Structures]]
[[Category: Plasmodium falciparum 3d7]]
[[Category: Plasmodium falciparum 3D7]]
[[Category: Amaya, M F.]]
[[Category: Amaya MF]]
[[Category: Arrowsmith, C H.]]
[[Category: Arrowsmith CH]]
[[Category: Artz, J D.]]
[[Category: Artz JD]]
[[Category: Bochkarev, A.]]
[[Category: Bochkarev A]]
[[Category: Bountra,C.]]
[[Category: Bountra C]]
[[Category: Cossar, D.]]
[[Category: Cossar D]]
[[Category: Edwards, A M.]]
[[Category: Edwards AM]]
[[Category: Hills, T.]]
[[Category: Hills T]]
[[Category: Hui, R.]]
[[Category: Hui R]]
[[Category: Kozieradzki, I.]]
[[Category: Kozieradzki I]]
[[Category: Lew, J.]]
[[Category: Lew J]]
[[Category: SGC, Structural Genomics Consortium.]]
[[Category: Pizarro JC]]
[[Category: Schapira, M.]]
[[Category: Schapira M]]
[[Category: Senesterra, G.]]
[[Category: Senesterra G]]
[[Category: Vedadi, M.]]
[[Category: Vedadi M]]
[[Category: Wasney, G.]]
[[Category: Wasney G]]
[[Category: Weigelt, J.]]
[[Category: Weigelt J]]
[[Category: Wernimont, A K.]]
[[Category: Wernimont AK]]
[[Category: Xiao, T.]]
[[Category: Xiao T]]
[[Category: Izarro, J C.]]
[[Category: Choline kinase]]
[[Category: Kinase]]
[[Category: Malaria]]
[[Category: Sgc]]
[[Category: Structural genomic]]
[[Category: Structural genomics consortium]]
[[Category: Transferase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 11 12:43:24 2009''