3lay: Difference between revisions

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{{Seed}}
[[Image:3lay.jpg|left|200px]]


<!--
==Alpha-Helical barrel formed by the decamer of the zinc resistance-associated protein (STM4172) from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2==
The line below this paragraph, containing "STRUCTURE_3lay", creates the "Structure Box" on the page.
<StructureSection load='3lay' size='340' side='right'caption='[[3lay]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3lay]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LAY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LAY FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lay FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lay OCA], [https://pdbe.org/3lay PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lay RCSB], [https://www.ebi.ac.uk/pdbsum/3lay PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lay ProSAT]</span></td></tr>
{{STRUCTURE_3lay|  PDB=3lay  |  SCENE=  }}
</table>
 
== Function ==
===Alpha-Helical barrel formed by the decamer of the zinc resistance-associated protein (STM4172) from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2===
[https://www.uniprot.org/uniprot/ZRAP_SALTY ZRAP_SALTY] Binds zinc. Could be an important component of the zinc-balancing mechanism (By similarity).
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
3LAY is a 10 chains structure with sequences from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium Salmonella enterica subsp. enterica serovar typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LAY OCA].  
  <jmolCheckbox>
[[Category: Salmonella enterica subsp. enterica serovar typhimurium]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/la/3lay_consurf.spt"</scriptWhenChecked>
[[Category: Anderson, W F.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Dubrovska, I.]]
  </jmolCheckbox>
[[Category: Filippova, E V.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lay ConSurf].
[[Category: Minasov, G.]]
<div style="clear:both"></div>
[[Category: Shuvalova, L.]]
__TOC__
[[Category: Winsor, J.]]
</StructureSection>
[[Category: Center for structural genomics of infectious disease]]
[[Category: Large Structures]]
[[Category: Csgid]]
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
[[Category: Periplasm]]
[[Category: Anderson WF]]
[[Category: Salmonella typhimurium lt2]]
[[Category: Dubrovska I]]
[[Category: Structural genomic]]
[[Category: Filippova EV]]
[[Category: Zinc]]
[[Category: Minasov G]]
[[Category: Zinc resistance-associated protein]]
[[Category: Shuvalova L]]
[[Category: Zrap]]
[[Category: Winsor J]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 20 16:12:26 2010''

Latest revision as of 10:19, 21 February 2024

Alpha-Helical barrel formed by the decamer of the zinc resistance-associated protein (STM4172) from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2

3lay, resolution 2.70Å

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