3xim: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3xim.png|left|200px]]


<!--
==ARGININE RESIDUES AS STABILIZING ELEMENTS IN PROTEINS==
The line below this paragraph, containing "STRUCTURE_3xim", creates the "Structure Box" on the page.
<StructureSection load='3xim' size='340' side='right'caption='[[3xim]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3xim]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Actinoplanes_missouriensis Actinoplanes missouriensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3XIM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3XIM FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=SOR:D-SORBITOL'>SOR</scene></td></tr>
{{STRUCTURE_3xim| PDB=3xim |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3xim FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3xim OCA], [https://pdbe.org/3xim PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3xim RCSB], [https://www.ebi.ac.uk/pdbsum/3xim PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3xim ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/XYLA_ACTM4 XYLA_ACTM4]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xi/3xim_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3xim ConSurf].
<div style="clear:both"></div>


===ARGININE RESIDUES AS STABILIZING ELEMENTS IN PROTEINS===
==See Also==
 
*[[D-xylose isomerase 3D structures|D-xylose isomerase 3D structures]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_1540579}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 1540579 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_1540579}}
 
==About this Structure==
3XIM is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Actinoplanes_missouriensis Actinoplanes missouriensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3XIM OCA].
 
==Reference==
<ref group="xtra">PMID:1540579</ref><references group="xtra"/>
[[Category: Actinoplanes missouriensis]]
[[Category: Actinoplanes missouriensis]]
[[Category: Xylose isomerase]]
[[Category: Large Structures]]
[[Category: Brande, I Van Den.]]
[[Category: Chiadmi M]]
[[Category: Chiadmi, M.]]
[[Category: Demaeyer M]]
[[Category: Demaeyer, M.]]
[[Category: Janin J]]
[[Category: Denbroek, A Van.]]
[[Category: Jenkins J]]
[[Category: Janin, J.]]
[[Category: Lambeir A-M]]
[[Category: Jenkins, J.]]
[[Category: Laroche Y]]
[[Category: Lambeir, A M.]]
[[Category: Lasters I]]
[[Category: Laroche, Y.]]
[[Category: Matthyssens G]]
[[Category: Lasters, I.]]
[[Category: Mrabet NT]]
[[Category: Matthyssens, G.]]
[[Category: Quax WJ]]
[[Category: Mrabet, N T.]]
[[Category: Rey F]]
[[Category: Quax, W J.]]
[[Category: Stanssens P]]
[[Category: Rey, F.]]
[[Category: Van Den Brande I]]
[[Category: Stanssens, P.]]
[[Category: Van Denbroek A]]
[[Category: Vantilbeurgh, H.]]
[[Category: Vantilbeurgh H]]
[[Category: Wodak, S J.]]
[[Category: Wodak SJ]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 17:04:08 2009''