4xia: Difference between revisions

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{{Seed}}
[[Image:4xia.png|left|200px]]


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==STRUCTURES OF D-XYLOSE ISOMERASE FROM ARTHROBACTER STRAIN B3728 CONTAINING THE INHIBITORS XYLITOL AND D-SORBITOL AT 2.5 ANGSTROMS AND 2.3 ANGSTROMS RESOLUTION, RESPECTIVELY==
The line below this paragraph, containing "STRUCTURE_4xia", creates the "Structure Box" on the page.
<StructureSection load='4xia' size='340' side='right'caption='[[4xia]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[4xia]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arthrobacter_sp._NRRL_B3728 Arthrobacter sp. NRRL B3728]. The February 2006 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Alpha-amylase''  by David S. Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2006_2 10.2210/rcsb_pdb/mom_2006_2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XIA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4XIA FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SOR:D-SORBITOL'>SOR</scene></td></tr>
{{STRUCTURE_4xia| PDB=4xia |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4xia FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xia OCA], [https://pdbe.org/4xia PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4xia RCSB], [https://www.ebi.ac.uk/pdbsum/4xia PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4xia ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/XYLA_ARTS7 XYLA_ARTS7]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xi/4xia_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=4xia ConSurf].
<div style="clear:both"></div>


===STRUCTURES OF D-XYLOSE ISOMERASE FROM ARTHROBACTER STRAIN B3728 CONTAINING THE INHIBITORS XYLITOL AND D-SORBITOL AT 2.5 ANGSTROMS AND 2.3 ANGSTROMS RESOLUTION, RESPECTIVELY===
==See Also==
 
*[[D-xylose isomerase 3D structures|D-xylose isomerase 3D structures]]
 
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_2769749}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 2769749 is the PubMed ID number.
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{{ABSTRACT_PUBMED_2769749}}
 
==About this Structure==
4XIA is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arthrobacter_sp. Arthrobacter sp.]. The following page contains interesting information on the relation of 4XIA with [[http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/pdb74_1.html Alpha-amylase]]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XIA OCA].
 
==Reference==
Structures of D-xylose isomerase from Arthrobacter strain B3728 containing the inhibitors xylitol and D-sorbitol at 2.5 A and 2.3 A resolution, respectively., Henrick K, Collyer CA, Blow DM, J Mol Biol. 1989 Jul 5;208(1):129-57. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/2769749 2769749]
[[Category: Alpha-amylase]]
[[Category: Alpha-amylase]]
[[Category: Arthrobacter sp.]]
[[Category: Arthrobacter sp. NRRL B3728]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Xylose isomerase]]
[[Category: RCSB PDB Molecule of the Month]]
[[Category: Blow, D M.]]
[[Category: Blow DM]]
[[Category: Collyer, C A.]]
[[Category: Collyer CA]]
[[Category: Henrick, K.]]
[[Category: Henrick K]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jul  3 13:54:43 2008''
Retrieved from "https://proteopedia.org/4xia"