2db0: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(14 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2db0.gif|left|200px]]<br /><applet load="2db0" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2db0, resolution 2.2&Aring;" />
'''Crystal structure of PH0542'''<br />


==About this Structure==
==Crystal structure of PH0542==
2DB0 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB0 OCA].  
<StructureSection load='2db0' size='340' side='right'caption='[[2db0]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
[[Category: Pyrococcus horikoshii]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2db0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DB0 FirstGlance]. <br>
[[Category: Handa, N.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
[[Category: Kishishita, S.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2db0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2db0 OCA], [https://pdbe.org/2db0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2db0 RCSB], [https://www.ebi.ac.uk/pdbsum/2db0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2db0 ProSAT], [https://www.topsan.org/Proteins/RSGI/2db0 TOPSAN]</span></td></tr>
[[Category: Murayama, K.]]
</table>
[[Category: Nishino, A.]]
== Function ==
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[https://www.uniprot.org/uniprot/O58277_PYRHO O58277_PYRHO]  
[[Category: Shirouzu, M.]]
== Evolutionary Conservation ==
[[Category: heat repeats]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: helical structure]]
Check<jmol>
[[Category: national project on protein structural and functional analyses]]
  <jmolCheckbox>
[[Category: nppsfa]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/2db0_consurf.spt"</scriptWhenChecked>
[[Category: riken structural genomics/proteomics initiative]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: rsgi]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: structural genomics]]
  </jmolCheckbox>
 
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2db0 ConSurf].
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:56:55 2008''
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Handa N]]
[[Category: Kishishita S]]
[[Category: Murayama K]]
[[Category: Nishino A]]
[[Category: Shirouzu M]]
Retrieved from "https://proteopedia.org/2db0"