2dql: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
 
(13 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2dql.png|left|200px]]


<!--
==Crystal structure of the circadian clock associated protein Pex from anabaena==
The line below this paragraph, containing "STRUCTURE_2dql", creates the "Structure Box" on the page.
<StructureSection load='2dql' size='340' side='right'caption='[[2dql]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2dql]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Nostoc_sp._PCC_7120_=_FACHB-418 Nostoc sp. PCC 7120 = FACHB-418]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DQL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DQL FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
{{STRUCTURE_2dql|  PDB=2dql  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dql FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dql OCA], [https://pdbe.org/2dql PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dql RCSB], [https://www.ebi.ac.uk/pdbsum/2dql PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dql ProSAT]</span></td></tr>
 
</table>
===Crytal structure of the circadian clock associated protein Pex from anabaena===
== Function ==
 
[https://www.uniprot.org/uniprot/Q8YQ56_NOSS1 Q8YQ56_NOSS1]  
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_19032344}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 19032344 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dq/2dql_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_19032344}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
2DQL is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Nostoc_sp._pcc_7120 Nostoc sp. pcc 7120]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DQL OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dql ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:19032344</ref><references group="xtra"/>
</StructureSection>
[[Category: Nostoc sp. pcc 7120]]
[[Category: Large Structures]]
[[Category: Kouyama, T.]]
[[Category: Nostoc sp. PCC 7120 = FACHB-418]]
[[Category: Kurosawa, T.]]
[[Category: Kouyama T]]
[[Category: Circadian clock associated protein]]
[[Category: Kurosawa S]]
[[Category: Circadian clock protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 21 09:13:36 2009''

Latest revision as of 13:47, 13 March 2024

Crystal structure of the circadian clock associated protein Pex from anabaena

2dql, resolution 1.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=2dql&oldid=4088719"