2e5l: Difference between revisions

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{{Seed}}
[[Image:2e5l.png|left|200px]]


<!--
==A snapshot of the 30S ribosomal subunit capturing mRNA via the Shine- Dalgarno interaction==
The line below this paragraph, containing "STRUCTURE_2e5l", creates the "Structure Box" on the page.
<StructureSection load='2e5l' size='340' side='right'caption='[[2e5l]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2e5l]] is a 11 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E5L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E5L FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_2e5l| PDB=2e5l |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e5l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e5l OCA], [https://pdbe.org/2e5l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e5l RCSB], [https://www.ebi.ac.uk/pdbsum/2e5l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e5l ProSAT], [https://www.topsan.org/Proteins/RSGI/2e5l TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/RS2_THET8 RS2_THET8] Spans the head-body hinge region of the 30S subunit. Is loosely associated with the 30S subunit.[HAMAP-Rule:MF_00291_B]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e5/2e5l_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2e5l ConSurf].
<div style="clear:both"></div>


===A snapshot of the 30S ribosomal subunit capturing mRNA via the Shine- Dalgarno interaction===
==See Also==
 
*[[Ribosomal protein THX 3D structures|Ribosomal protein THX 3D structures]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_17355865}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 17355865 is the PubMed ID number.
[[Category: Synthetic construct]]
-->
{{ABSTRACT_PUBMED_17355865}}
 
==About this Structure==
2E5L is a 23 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E5L OCA].
 
==Reference==
<ref group="xtra">PMID:17355865</ref><references group="xtra"/>
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
[[Category: Fucini, P.]]
[[Category: Fucini P]]
[[Category: Hanawa-Suetsugu, K.]]
[[Category: Hanawa-Suetsugu K]]
[[Category: Harms, J M.]]
[[Category: Harms JM]]
[[Category: Kaminishi, T.]]
[[Category: Kaminishi T]]
[[Category: Kawazoe, M.]]
[[Category: Kawazoe M]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Schluenzen F]]
[[Category: Schluenzen, F.]]
[[Category: Shirouzu M]]
[[Category: Shirouzu, M.]]
[[Category: Takemoto C]]
[[Category: Takemoto, C.]]
[[Category: Wilson DN]]
[[Category: Wilson, D N.]]
[[Category: Yokoyama S]]
[[Category: Yokoyama, S.]]
[[Category: 30s ribosomal subunit]]
[[Category: 5' untranslated region]]
[[Category: Mrna capture]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: Shine-dalgarno interaction]]
[[Category: Structural genomic]]
[[Category: Translation initiation]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 12:15:05 2009''
Retrieved from "https://proteopedia.org/2e5l"