2qp2: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
 
(9 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2qp2.png|left|200px]]


<!--
==Structure of a MACPF/perforin-like protein==
The line below this paragraph, containing "STRUCTURE_2qp2", creates the "Structure Box" on the page.
<StructureSection load='2qp2' size='340' side='right'caption='[[2qp2]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2qp2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Photorhabdus_laumondii_subsp._laumondii Photorhabdus laumondii subsp. laumondii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QP2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QP2 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
{{STRUCTURE_2qp2|  PDB=2qp2  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qp2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qp2 OCA], [https://pdbe.org/2qp2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qp2 RCSB], [https://www.ebi.ac.uk/pdbsum/2qp2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qp2 ProSAT]</span></td></tr>
 
</table>
===Structure of a MACPF/perforin-like protein===
== Function ==
 
[https://www.uniprot.org/uniprot/Q7N6X0_PHOLL Q7N6X0_PHOLL]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_17717151}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 17717151 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qp/2qp2_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_17717151}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
2QP2 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Photorhabdus_luminescens_subsp._laumondii Photorhabdus luminescens subsp. laumondii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QP2 OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qp2 ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
A common fold mediates vertebrate defense and bacterial attack., Rosado CJ, Buckle AM, Law RH, Butcher RE, Kan WT, Bird CH, Ung K, Browne KA, Baran K, Bashtannyk-Puhalovich TA, Faux NG, Wong W, Porter CJ, Pike RN, Ellisdon AM, Pearce MC, Bottomley SP, Emsley J, Smith AI, Rossjohn J, Hartland EL, Voskoboinik I, Trapani JA, Bird PI, Dunstone MA, Whisstock JC, Science. 2007 Sep 14;317(5844):1548-51. Epub 2007 Aug 23. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17717151 17717151]
</StructureSection>
[[Category: Photorhabdus luminescens subsp. laumondii]]
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Photorhabdus laumondii subsp. laumondii]]
[[Category: Baran, K.]]
[[Category: Baran K]]
[[Category: Bashtannyk-Puhalovich, T A.]]
[[Category: Bashtannyk-Puhalovich TA]]
[[Category: Bird, C H.]]
[[Category: Bird CH]]
[[Category: Bird, P I.]]
[[Category: Bird PI]]
[[Category: Bottomley, S P.]]
[[Category: Bottomley SP]]
[[Category: Browne, K A.]]
[[Category: Browne KA]]
[[Category: Buckle, A M.]]
[[Category: Buckle AM]]
[[Category: Butcher, R E.]]
[[Category: Butcher RE]]
[[Category: Dunstone, M A.]]
[[Category: Dunstone MA]]
[[Category: Ellisdon, A M.]]
[[Category: Ellisdon AM]]
[[Category: Emsley, J.]]
[[Category: Emsley J]]
[[Category: Faux, N G.]]
[[Category: Faux NG]]
[[Category: Hartland, E L.]]
[[Category: Hartland EL]]
[[Category: Kan, W T.]]
[[Category: Kan WT]]
[[Category: Law, R H.P.]]
[[Category: Law RHP]]
[[Category: Pearce, M C.]]
[[Category: Pearce MC]]
[[Category: Pike, R N.]]
[[Category: Pike RN]]
[[Category: Porter, C J.]]
[[Category: Porter CJ]]
[[Category: Rosado, C J.]]
[[Category: Rosado CJ]]
[[Category: Rossjohn, J.]]
[[Category: Rossjohn J]]
[[Category: Smith, A I.]]
[[Category: Smith AI]]
[[Category: Trapani, J A.]]
[[Category: Trapani JA]]
[[Category: Ung, K.]]
[[Category: Ung K]]
[[Category: Voskoboinik, I.]]
[[Category: Voskoboinik I]]
[[Category: Whisstock, J C.]]
[[Category: Whisstock JC]]
[[Category: Wong, W.]]
[[Category: Wong W]]
[[Category: Toxin]]
[[Category: Unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 20:31:14 2008''

Latest revision as of 13:54, 13 March 2024

Structure of a MACPF/perforin-like protein

2qp2, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=2qp2&oldid=4089105"