2ywb: Difference between revisions

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[[Image:2ywb.gif|left|200px]]<br /><applet load="2ywb" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2ywb, resolution 2.10&Aring;" />
'''Crystal structure of GMP synthetase from Thermus thermophilus'''<br />


==About this Structure==
==Crystal structure of GMP synthetase from Thermus thermophilus==
2YWB is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWB OCA].  
<StructureSection load='2ywb' size='340' side='right'caption='[[2ywb]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
[[Category: Thermus thermophilus]]
<table><tr><td colspan='2'>[[2ywb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YWB FirstGlance]. <br>
[[Category: Baba, S.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
[[Category: Ishii, T.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ywb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywb OCA], [https://pdbe.org/2ywb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ywb RCSB], [https://www.ebi.ac.uk/pdbsum/2ywb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ywb ProSAT], [https://www.topsan.org/Proteins/RSGI/2ywb TOPSAN]</span></td></tr>
[[Category: Kanagawa, M.]]
</table>
[[Category: Kawai, G.]]
== Function ==
[[Category: Kuramitsu, S.]]
[https://www.uniprot.org/uniprot/GUAA_THET8 GUAA_THET8] Catalyzes the synthesis of GMP from XMP (By similarity).
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
== Evolutionary Conservation ==
[[Category: Sampei, G.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Yanai, H.]]
Check<jmol>
[[Category: Yokoyama, S.]]
  <jmolCheckbox>
[[Category: atp binding]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/2ywb_consurf.spt"</scriptWhenChecked>
[[Category: gmp synthetase]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: ligase]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: national project on protein structural and functional analyses]]
  </jmolCheckbox>
[[Category: nppsfa]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ywb ConSurf].
[[Category: purine nucleotide biosynthetic pathway]]
<div style="clear:both"></div>
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: structural genomics]]
[[Category: xmp binding]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:58:24 2008''
==See Also==
*[[GMP synthase|GMP synthase]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus HB8]]
[[Category: Baba S]]
[[Category: Ishii T]]
[[Category: Kanagawa M]]
[[Category: Kawai G]]
[[Category: Kuramitsu S]]
[[Category: Sampei G]]
[[Category: Yanai H]]
[[Category: Yokoyama S]]