3a0o: Difference between revisions

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[[Image:3a0o.png|left|200px]]


<!--
==Crystal structure of alginate lyase from Agrobacterium tumefaciens C58==
The line below this paragraph, containing "STRUCTURE_3a0o", creates the "Structure Box" on the page.
<StructureSection load='3a0o' size='340' side='right'caption='[[3a0o]], [[Resolution|resolution]] 2.11&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3a0o]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A0O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A0O FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.11&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
{{STRUCTURE_3a0o|  PDB=3a0o  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a0o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a0o OCA], [https://pdbe.org/3a0o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a0o RCSB], [https://www.ebi.ac.uk/pdbsum/3a0o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a0o ProSAT]</span></td></tr>
 
</table>
===Crystal structure of alginate lyase from Agrobacterium tumefaciens C58===
== Function ==
 
[https://www.uniprot.org/uniprot/A9CEJ9_AGRFC A9CEJ9_AGRFC]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_20507980}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 20507980 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a0/3a0o_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_20507980}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
[[3a0o]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A0O OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3a0o ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:20507980</ref><references group="xtra"/>
</StructureSection>
[[Category: Agrobacterium tumefaciens]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Hashimoto, W.]]
[[Category: Large Structures]]
[[Category: Mikami, B.]]
[[Category: Hashimoto W]]
[[Category: Murata, K.]]
[[Category: Mikami B]]
[[Category: Ochiai, A.]]
[[Category: Murata K]]
[[Category: Yamasaki, M.]]
[[Category: Ochiai A]]
[[Category: Yamasaki M]]

Latest revision as of 13:59, 13 March 2024

Crystal structure of alginate lyase from Agrobacterium tumefaciens C58

3a0o, resolution 2.11Å

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