3tgd: Difference between revisions

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[[Image:3tgd.jpg|left|200px]]


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==Crystal structure of the human ubiquitin-conjugating enzyme (E2) UbcH5b==
The line below this paragraph, containing "STRUCTURE_3tgd", creates the "Structure Box" on the page.
<StructureSection load='3tgd' size='340' side='right'caption='[[3tgd]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3tgd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TGD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TGD FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tgd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tgd OCA], [https://pdbe.org/3tgd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tgd RCSB], [https://www.ebi.ac.uk/pdbsum/3tgd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tgd ProSAT]</span></td></tr>
{{STRUCTURE_3tgd|  PDB=3tgd  |  SCENE=  }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/UB2D2_HUMAN UB2D2_HUMAN] Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes 'Lys-48'-linked polyubiquitination. Mediates the selective degradation of short-lived and abnormal proteins. Functions in the E6/E6-AP-induced ubiquitination of p53/TP53. Mediates ubiquitination of PEX5 and autoubiquitination of STUB1 and TRAF6. Involved in the signal-induced conjugation and subsequent degradation of NFKBIA, FBXW2-mediated GCM1 ubiquitination and degradation, MDM2-dependent degradation of p53/TP53 and the activation of MAVS in the mitochondria by DDX58/RIG-I in response to viral infection. Essential for viral activation of IRF3.<ref>PMID:10329681</ref> <ref>PMID:15280377</ref> <ref>PMID:18042044</ref> <ref>PMID:18703417</ref> <ref>PMID:18359941</ref> <ref>PMID:19854139</ref> <ref>PMID:20403326</ref> <ref>PMID:20061386</ref>  


===Crystal structure of the human ubiquitin-conjugating enzyme (E2) UbcH5b===
==See Also==
 
*[[3D structures of ubiquitin conjugating enzyme|3D structures of ubiquitin conjugating enzyme]]
 
== References ==
==About this Structure==
<references/>
[[3tgd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TGD OCA].
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Ubiquitin--protein ligase]]
[[Category: Large Structures]]
[[Category: Amick, J.]]
[[Category: Amick J]]
[[Category: Misra, S.]]
[[Category: Misra S]]
[[Category: Page, R C.]]
[[Category: Page RC]]
[[Category: Ligase]]
[[Category: Ubc-like]]
[[Category: Ubiquitin binding]]
[[Category: Ubiqutin-conjugating enzyme]]
Retrieved from "https://proteopedia.org/3tgd"