3drf: Difference between revisions

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{{Seed}}
[[Image:3drf.jpg|left|200px]]


<!--
==Lactococcal OppA complexed with an endogenous peptide in the closed conformation==
The line below this paragraph, containing "STRUCTURE_3drf", creates the "Structure Box" on the page.
<StructureSection load='3drf' size='340' side='right'caption='[[3drf]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3drf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactococcus_lactis_subsp._cremoris_MG1363 Lactococcus lactis subsp. cremoris MG1363]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DRF FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3drf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3drf OCA], [https://pdbe.org/3drf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3drf RCSB], [https://www.ebi.ac.uk/pdbsum/3drf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3drf ProSAT]</span></td></tr>
{{STRUCTURE_3drf|  PDB=3drf |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/A2RJ53_LACLM A2RJ53_LACLM]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dr/3drf_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3drf ConSurf].
<div style="clear:both"></div>


===Lactococcal OppA complexed with an endogenous peptide in the closed conformation===
==See Also==
 
*[[ABC transporter 3D structures|ABC transporter 3D structures]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_19300437}}, adds the Publication Abstract to the page
[[Category: Lactococcus lactis subsp. cremoris MG1363]]
(as it appears on PubMed at http://www.pubmed.gov), where 19300437 is the PubMed ID number.
[[Category: Large Structures]]
-->
[[Category: Berntsson RP-A]]
{{ABSTRACT_PUBMED_19300437}}
[[Category: Doeven MK]]
 
[[Category: Duurkens RH]]
==About this Structure==
[[Category: Marrink S-J]]
3DRF is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Lactococcus_lactis Lactococcus lactis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRF OCA].
[[Category: Poolman B]]
 
[[Category: Sengupta D]]
==Reference==
[[Category: Slotboom D-J]]
<ref group="xtra">PMID:19300437</ref><references group="xtra"/>
[[Category: Thunnissen A-M]]
[[Category: Lactococcus lactis]]
[[Category: Berntsson, R P.A.]]
[[Category: Doeven, M K.]]
[[Category: Duurkens, R H.]]
[[Category: Marrink, S J.]]
[[Category: Poolman, B.]]
[[Category: Sengupta, D.]]
[[Category: Slotboom, D J.]]
[[Category: Thunnissen, A M.]]
[[Category: Oligo-peptide binding]]
[[Category: Peptide binding protein]]
[[Category: Venus fly-trap]]
[[Category: Voluminous binding cavity]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr  2 15:29:53 2009''
Retrieved from "https://proteopedia.org/3drf"