3fid: Difference between revisions

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{{Seed}}
[[Image:3fid.png|left|200px]]


<!--
==LpxR from Salmonella typhimurium==
The line below this paragraph, containing "STRUCTURE_3fid", creates the "Structure Box" on the page.
<StructureSection load='3fid' size='340' side='right'caption='[[3fid]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3fid]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FID OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FID FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CXE:PENTAETHYLENE+GLYCOL+MONODECYL+ETHER'>CXE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_3fid|  PDB=3fid  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fid FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fid OCA], [https://pdbe.org/3fid PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fid RCSB], [https://www.ebi.ac.uk/pdbsum/3fid PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fid ProSAT]</span></td></tr>
 
</table>
===LpxR from Salmonella typhimurium===
== Function ==
 
[https://www.uniprot.org/uniprot/Q8ZPT3_SALTY Q8ZPT3_SALTY]  
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_19174515}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 19174515 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fi/3fid_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_19174515}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
3FID is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Salmonella_typhimurium Salmonella typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FID OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fid ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:19174515</ref><references group="xtra"/>
</StructureSection>
[[Category: Salmonella typhimurium]]
[[Category: Large Structures]]
[[Category: Gros, P.]]
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
[[Category: Rutten, L.]]
[[Category: Gros P]]
[[Category: Lipopolysaccharide-modifying outer membrane enzyme]]
[[Category: Rutten L]]
[[Category: Membrane protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 10 15:07:07 2009''

Latest revision as of 08:25, 20 March 2024

LpxR from Salmonella typhimurium

3fid, resolution 1.90Å

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