1f8w: Difference between revisions

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{{Seed}}
[[Image:1f8w.png|left|200px]]


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==CRYSTAL STRUCTURE OF NADH PEROXIDASE MUTANT: R303M==
The line below this paragraph, containing "STRUCTURE_1f8w", creates the "Structure Box" on the page.
<StructureSection load='1f8w' size='340' side='right'caption='[[1f8w]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1f8w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F8W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1F8W FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSX:S-OXY+CYSTEINE'>CSX</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
{{STRUCTURE_1f8w| PDB=1f8w |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1f8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1f8w OCA], [https://pdbe.org/1f8w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1f8w RCSB], [https://www.ebi.ac.uk/pdbsum/1f8w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1f8w ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/NAPE_ENTFA NAPE_ENTFA] Peroxidase whose active site is a redox-active cysteine-sulfenic acid.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f8/1f8w_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1f8w ConSurf].
<div style="clear:both"></div>


===CRYSTAL STRUCTURE OF NADH PEROXIDASE MUTANT: R303M===
==See Also==
 
*[[NADH peroxidase|NADH peroxidase]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_10956025}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 10956025 is the PubMed ID number.
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{{ABSTRACT_PUBMED_10956025}}
 
==About this Structure==
1F8W is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F8W OCA].
 
==Reference==
Analysis of the kinetic and redox properties of the NADH peroxidase R303M mutant: correlation with the crystal structure., Crane EJ 3rd, Yeh JI, Luba J, Claiborne A, Biochemistry. 2000 Aug 29;39(34):10353-64. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10956025 10956025]
[[Category: Enterococcus faecalis]]
[[Category: Enterococcus faecalis]]
[[Category: NADH peroxidase]]
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Claiborne A]]
[[Category: Claiborne, A.]]
[[Category: Hol WGJ]]
[[Category: Hol, W G.J.]]
[[Category: Yeh JI]]
[[Category: Yeh, J I.]]
[[Category: Fad]]
[[Category: Interface]]
[[Category: Nad-binding domain]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 02:53:10 2008''
Retrieved from "https://proteopedia.org/1f8w"